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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
192.7
nTPM
FANTOM5:
482.3
Scaled Tags Per Million
Pig:
261.6
nTPM
Allen mouse:
20.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
192.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 165.0
2301
Female, age 85, both hemispheres
194.0
2188
Female, age 91, both hemispheres
171.7
2090
Male, age 80, both hemispheres
155.4
1984
Male, age 76, both hemispheres
138.9
Dorsal cochlear nucleus nTPM: 141.4
2187
Female, age 91, both hemispheres
180.5
2058
Male, age 76, both hemispheres
139.6
2378
Male, age 80, both hemispheres
134.2
2802
Male, age 74, right hemisphere
132.0
2370
Male, age 61, both hemispheres
120.9
Dorsal tegmental nucleus nTPM: 146.2
2083
Male, age 80, both hemispheres
168.7
2326
Male, age 74, both hemispheres
147.6
2358
Male, age 61, both hemispheres
146.6
1936
Male, age 76, left hemisphere
122.0
Dorsolateral tegmental area nTPM: 143.9
2751
Female, age 85, both hemispheres
180.2
2654
Male, age 80, both hemispheres
167.6
2337
Male, age 61, both hemispheres
138.6
2141
Male, age 76, both hemispheres
117.4
2360
Male, age 74, both hemispheres
116.0
Kolliker-Fuse nucleus nTPM: 177.0
2793
Female, age 91, left hemisphere
202.0
2163
Male, age 80, both hemispheres
201.9
2315
Male, age 76, right hemisphere
126.9
Lateral lemniscal nuclei nTPM: 171.9
2169
Male, age 76, both hemispheres
196.1
2036
Male, age 80, both hemispheres
189.6
2320
Female, age 91, left hemisphere
165.3
2746
Female, age 85, left hemisphere
162.2
2453
Male, age 74, right hemisphere
146.2
Lateral parabrachial nucleus nTPM: 173.7
2792
Male, age 76, both hemispheres
201.0
2013
Male, age 80, both hemispheres
183.0
2139
Female, age 85, right hemisphere
181.1
2790
Male, age 61, both hemispheres
129.8
Lateral vestibular nucleus nTPM: 181.3
2184
Male, age 76, both hemispheres
186.1
2311
Male, age 80, both hemispheres
176.4
Locus coeruleus nTPM: 132.7
2317
Female, age 72, unknown
150.9
2123
Female, age 91, both hemispheres
143.2
2014
Male, age 55, unknown
141.0
2162
Male, age 80, both hemispheres
135.4
2720
Male, age 74, both hemispheres
124.5
1980
Male, age 76, both hemispheres
118.0
2788
Male, age 74, unknown
115.6
Medial parabrachial nucleus nTPM: 177.9
2170
Female, age 91, both hemispheres
229.7
2854
Male, age 80, both hemispheres
196.9
2156
Male, age 61, both hemispheres
157.0
2463
Female, age 85, right hemisphere
153.5
2786
Male, age 76, both hemispheres
152.5
Medial periolivary nuclei nTPM: 169.0
2791
Male, age 74, right hemisphere
187.0
2171
Female, age 85, both hemispheres
183.5
2063
Male, age 76, both hemispheres
180.9
2081
Male, age 80, both hemispheres
152.3
2458
Female, age 91, both hemispheres
141.2
Motor facial nucleus nTPM: 169.6
2365
Male, age 74, right hemisphere
221.7
2062
Male, age 76, both hemispheres
177.1
2697
Female, age 85, both hemispheres
165.9
2795
Female, age 91, both hemispheres
160.1
2126
Male, age 61, both hemispheres
152.4
2327
Male, age 80, both hemispheres
140.2
Motor trigeminal nucleus nTPM: 146.5
2560
Male, age 74, both hemispheres
166.5
2079
Male, age 80, both hemispheres
144.8
2335
Male, age 61, both hemispheres
144.1
2321
Female, age 91, both hemispheres
141.2
2309
Male, age 76, both hemispheres
135.8
Nuclei of the trapezoid body nTPM: 168.8
1983
Male, age 76, both hemispheres
189.9
2159
Male, age 61, both hemispheres
189.7
2735
Female, age 85, both hemispheres
162.6
2166
Male, age 80, both hemispheres
159.8
2368
Female, age 91, both hemispheres
141.8
Nucleus raphe magnus nTPM: 178.1
2160
Male, age 61, both hemispheres
203.7
2051
Male, age 76, both hemispheres
196.5
2328
Male, age 80, both hemispheres
172.7
2455
Male, age 74, both hemispheres
170.8
2172
Female, age 85, both hemispheres
165.8
2459
Female, age 91, both hemispheres
159.2
Paramedian reticular nucleus nTPM: 150.6
2050
Female, age 85, both hemispheres
178.4
2057
Male, age 80, both hemispheres
150.1
2313
Male, age 61, both hemispheres
149.8
2052
Male, age 76, both hemispheres
124.0
Pedunculopontine tegmental nucleus nTPM: 148.3
2334
Male, age 80, both hemispheres
155.6
1921
Female, age 85, both hemispheres
149.4
2338
Male, age 61, both hemispheres
139.9
Pontine nuclei nTPM: 192.7
2454
Male, age 74, left hemisphere
228.8
1863
Male, age 55, unknown
228.3
2787
Female, age 85, both hemispheres
219.7
2109
Female, age 72, unknown
196.1
1968
Male, age 76, left hemisphere
194.6
2319
Female, age 91, both hemispheres
173.4
2727
Male, age 61, right hemisphere
153.7
2115
Male, age 80, left hemisphere
147.2
Pontine raphe nucleus nTPM: 144.3
2122
Female, age 85, midline
153.8
2853
Male, age 76, midline
134.8
Posteroventral cochlear nucleus nTPM: 150.2
2070
Male, age 76, both hemispheres
173.0
2341
Male, age 80, both hemispheres
157.3
2135
Female, age 91, both hemispheres
156.5
2752
Female, age 85, both hemispheres
139.0
2371
Male, age 61, both hemispheres
125.1
Principal sensory trigeminal nucleus nTPM: 169.4
2324
Male, age 76, both hemispheres
178.7
2367
Female, age 91, left hemisphere
174.1
2158
Male, age 61, both hemispheres
173.6
2008
Male, age 80, left hemisphere
151.3
Reticular pontine nucleus, caudal nTPM: 163.9
2092
Male, age 76, both hemispheres
183.4
2559
Male, age 74, both hemispheres
162.6
2457
Female, age 91, both hemispheres
155.3
2332
Male, age 80, right hemisphere
154.2
Reticular pontine nucleus, oral nTPM: 173.8
2366
Female, age 91, both hemispheres
180.0
1939
Male, age 80, both hemispheres
176.7
2361
Male, age 74, both hemispheres
173.3
2012
Female, age 85, both hemispheres
170.5
2167
Male, age 76, both hemispheres
168.4
Reticulotegmental nucleus nTPM: 150.9
2322
Female, age 91, both hemispheres
181.1
2333
Male, age 80, both hemispheres
159.9
2325
Male, age 76, both hemispheres
131.5
2452
Male, age 74, both hemispheres
131.1
Spinal trigeminal nucleus, oral nTPM: 167.8
2164
Male, age 80, both hemispheres
186.2
1978
Male, age 76, both hemispheres
164.2
2737
Female, age 85, both hemispheres
153.0
Subcoeruleus area nTPM: 150.3
2369
Female, age 85, left hemisphere
185.3
1958
Male, age 80, both hemispheres
159.5
2089
Male, age 76, left hemisphere
151.6
2323
Female, age 91, left hemisphere
149.9
2451
Male, age 74, both hemispheres
105.0
Superior olive nTPM: 176.5
2364
Male, age 74, right hemisphere
218.8
2020
Male, age 76, both hemispheres
180.6
2329
Male, age 80, right hemisphere
168.0
1875
Female, age 85, both hemispheres
167.1
2561
Female, age 91, both hemispheres
148.1
Ventral periolivary nuclei nTPM: 172.5
2023
Male, age 76, both hemispheres
197.4
2130
Female, age 85, both hemispheres
186.3
2165
Male, age 80, both hemispheres
181.4
2794
Female, age 91, left hemisphere
124.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 164.6
2840
Female, age 85, both hemispheres
186.3
1959
Male, age 76, both hemispheres
176.6
2161
Male, age 80, both hemispheres
168.8
2449
Male, age 74, both hemispheres
163.8
2456
Female, age 91, both hemispheres
153.9
2359
Male, age 61, both hemispheres
138.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
261.6
Pig sample
Sample description
nTPM
Pons nTPM: 261.6
Samples: 4
Max nTPM: 351.0
Min nTPM: 192.8
Sample A
Female
246.0
Sample B
Female
192.8
Sample C
Male
256.7
Sample D
Male
351.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
