HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:56.2 nTPM
HPA Brain:56.4 nTPM
GTEx:56.2 nTPM
FANTOM5:49.2 Scaled Tags Per Million
Pig:117.8 nTPM
Mouse:89.7 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065931
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.4
Sample id Sample description nTPM
Hippocampus
nTPM: 45.0
1898 Male, age 80, left hemisphere 52.3
2621 Female, age 67, right hemisphere 48.2
1855 Male, age 76, left hemisphere 44.8
2148 Female, age 91, left hemisphere 42.6
2529 Female, age 94, left hemisphere 41.7
1911 Female, age 85, right hemisphere 40.3
Dentate gyrus
nTPM: 46.8
2530 Female, age 94, left hemisphere 54.7
2528 Male, age 74, both hemispheres 47.6
2246 Female, age 85, both hemispheres 46.0
2010 Male, age 76, both hemispheres 45.6
1927 Female, age 91, both hemispheres 45.0
2531 Female, age 67, both hemispheres 41.7
Entorhinal gyrus
nTPM: 47.4
2117 Female, age 91, right hemisphere 52.6
2764 Male, age 80, right hemisphere 51.7
1938 Female, age 85, left hemisphere 50.0
1787 Male, age 76, left hemisphere 47.9
2613 Female, age 94, left hemisphere 41.3
2686 Male, age 75, right hemisphere 41.1
Hippocampus, CA1
nTPM: 49.9
2749 Male, age 80, left hemisphere 66.3
2527 Male, age 74, both hemispheres 54.2
1873 Female, age 85, both hemispheres 46.2
2082 Female, age 91, right hemisphere 42.9
2045 Male, age 76, both hemispheres 39.8
Hippocampus, CA2
nTPM: 49.7
1963 Male, age 80, left hemisphere 56.2
1892 Male, age 76, both hemispheres 52.7
2437 Female, age 94, left hemisphere 50.7
2249 Male, age 74, both hemispheres 50.1
1940 Female, age 85, left hemisphere 46.9
2113 Female, age 91, right hemisphere 41.4
Hippocampus, CA3
nTPM: 45.4
2436 Male, age 74, both hemispheres 50.2
2137 Male, age 80, left hemisphere 49.3
1867 Male, age 76, both hemispheres 48.6
1891 Female, age 85, both hemispheres 45.8
2861 Female, age 67, both hemispheres 40.4
2620 Female, age 94, left hemisphere 38.4
Parahippocampal cortex
nTPM: 47.7
1850 Male, age 80, both hemispheres 54.0
2532 Female, age 72, left hemisphere 53.3
1933 Female, age 85, both hemispheres 53.2
1990 Female, age 91, right hemisphere 48.8
2250 Female, age 67, right hemisphere 48.3
2245 Female, age 91, both hemispheres 47.5
2692 Male, age 74, both hemispheres 45.3
2018 Male, age 76, both hemispheres 44.8
2693 Female, age 94, both hemispheres 42.5
2622 Female, age 67, right hemisphere 39.0
Perirhinal gyrus
nTPM: 56.4
1794 Male, age 80, right hemisphere 63.0
1847 Female, age 91, left hemisphere 60.0
1841 Female, age 85, right hemisphere 57.1
2521 Female, age 94, right hemisphere 53.2
2848 Male, age 76, right hemisphere 48.6
Subiculum
nTPM: 51.5
2438 Female, age 94, left hemisphere 58.4
1977 Female, age 85, both hemispheres 57.2
1901 Male, age 80, both hemispheres 55.2
2619 Male, age 74, both hemispheres 52.8
2042 Male, age 76, both hemispheres 43.3
2729 Female, age 91, right hemisphere 42.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.2
Samples: 197

Max nTPM: 129.1
Min nTPM: 23.5
Std nTPM: 13.3
Median nTPM: 54.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 129.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 90.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 87.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 83.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 83.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 80.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 79.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 78.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 76.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 76.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.2
FF:10153-102I9 76 years, female 50.7
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.8
Pig sample Sample description nTPM
Subiculum
nTPM: 104.3
Samples: 4

Max nTPM: 136.5
Min nTPM: 92.0
Sample A Female 136.5
Sample B Female 92.0
Sample C Male 93.4
Sample D Male 95.2
Dorsal hippocampus
nTPM: 117.8
Samples: 4

Max nTPM: 149.4
Min nTPM: 86.1
Sample A Female 149.4
Sample B Female 112.8
Sample C Male 122.9
Sample D Male 86.1
Entorhinal cortex
nTPM: 103.4
Samples: 4

Max nTPM: 109.4
Min nTPM: 88.7
Sample A Female 108.0
Sample B Female 109.4
Sample C Male 107.4
Sample D Male 88.7
Ventral hippocampus
nTPM: 108.9
Samples: 4

Max nTPM: 132.0
Min nTPM: 87.4
Sample A Female 132.0
Sample B Female 87.4
Sample C Male 114.9
Sample D Male 101.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 89.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.7
Samples: 4

Max nTPM: 93.4
Min nTPM: 84.2
Sample A Male 84.2
Sample B Male 93.4
Sample C Female 92.4
Sample D Female 88.6
Hippocampal formation
nTPM: 82.0
Samples: 4

Max nTPM: 94.5
Min nTPM: 76.9
Sample A Male 94.5
Sample B Male 78.0
Sample C Female 76.9
Sample D Female 78.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
69174298 Antisense, RP_050329_02_B03, Mouse strain C57BL/6J (56 days, male) 7.2

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