HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:11.0 nTPM
HPA Brain:17.9 nTPM
GTEx:11.0 nTPM
FANTOM5:59.5 Scaled Tags Per Million
Pig:42.0 nTPM
Mouse:50.3 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035344
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
2148 Female, age 91, left hemisphere 16.0
1855 Male, age 76, left hemisphere 15.4
2621 Female, age 67, right hemisphere 14.7
1911 Female, age 85, right hemisphere 11.9
1898 Male, age 80, left hemisphere 11.1
2529 Female, age 94, left hemisphere 9.0
Dentate gyrus
nTPM: 13.9
2531 Female, age 67, both hemispheres 18.2
2246 Female, age 85, both hemispheres 16.1
1927 Female, age 91, both hemispheres 14.9
2528 Male, age 74, both hemispheres 13.0
2010 Male, age 76, both hemispheres 11.5
2530 Female, age 94, left hemisphere 9.4
Entorhinal gyrus
nTPM: 14.8
2613 Female, age 94, left hemisphere 16.4
1938 Female, age 85, left hemisphere 15.8
2117 Female, age 91, right hemisphere 15.3
2764 Male, age 80, right hemisphere 14.9
1787 Male, age 76, left hemisphere 14.8
2686 Male, age 75, right hemisphere 11.8
Hippocampus, CA1
nTPM: 14.2
2527 Male, age 74, both hemispheres 17.2
2749 Male, age 80, left hemisphere 15.8
2045 Male, age 76, both hemispheres 14.0
2082 Female, age 91, right hemisphere 13.8
1873 Female, age 85, both hemispheres 10.2
Hippocampus, CA2
nTPM: 12.3
2249 Male, age 74, both hemispheres 14.6
1940 Female, age 85, left hemisphere 13.6
1892 Male, age 76, both hemispheres 12.9
2113 Female, age 91, right hemisphere 12.1
2437 Female, age 94, left hemisphere 10.7
1963 Male, age 80, left hemisphere 9.8
Hippocampus, CA3
nTPM: 14.7
2861 Female, age 67, both hemispheres 19.1
2620 Female, age 94, left hemisphere 16.2
2137 Male, age 80, left hemisphere 15.4
2436 Male, age 74, both hemispheres 13.7
1891 Female, age 85, both hemispheres 12.2
1867 Male, age 76, both hemispheres 11.8
Parahippocampal cortex
nTPM: 14.8
2693 Female, age 94, both hemispheres 19.3
1850 Male, age 80, both hemispheres 17.4
2622 Female, age 67, right hemisphere 16.4
2245 Female, age 91, both hemispheres 15.5
2532 Female, age 72, left hemisphere 14.7
1933 Female, age 85, both hemispheres 14.6
2692 Male, age 74, both hemispheres 14.2
2018 Male, age 76, both hemispheres 13.1
2250 Female, age 67, right hemisphere 12.7
1990 Female, age 91, right hemisphere 10.5
Perirhinal gyrus
nTPM: 17.9
2521 Female, age 94, right hemisphere 20.1
1847 Female, age 91, left hemisphere 19.2
1794 Male, age 80, right hemisphere 18.5
2848 Male, age 76, right hemisphere 17.4
1841 Female, age 85, right hemisphere 14.5
Subiculum
nTPM: 12.4
2438 Female, age 94, left hemisphere 14.5
2619 Male, age 74, both hemispheres 14.5
1977 Female, age 85, both hemispheres 14.0
2729 Female, age 91, right hemisphere 11.2
1901 Male, age 80, both hemispheres 10.3
2042 Male, age 76, both hemispheres 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.0
Samples: 197

Max nTPM: 25.3
Min nTPM: 3.2
Std nTPM: 2.8
Median nTPM: 10.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 25.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 20.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 18.5
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 18.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 18.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 17.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 17.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 16.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 16.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 16.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 16.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.5
FF:10169-103B7 60 years, female 70.6
FF:10153-102I9 76 years, female 48.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.0
Pig sample Sample description nTPM
Subiculum
nTPM: 38.7
Samples: 4

Max nTPM: 45.8
Min nTPM: 35.4
Sample A Female 45.8
Sample B Female 37.2
Sample C Male 35.4
Sample D Male 36.4
Dorsal hippocampus
nTPM: 42.0
Samples: 4

Max nTPM: 49.1
Min nTPM: 34.1
Sample A Female 49.1
Sample B Female 39.7
Sample C Male 45.0
Sample D Male 34.1
Entorhinal cortex
nTPM: 38.6
Samples: 4

Max nTPM: 41.8
Min nTPM: 33.5
Sample A Female 41.8
Sample B Female 40.9
Sample C Male 38.0
Sample D Male 33.5
Ventral hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 46.1
Min nTPM: 32.2
Sample A Female 40.7
Sample B Female 32.2
Sample C Male 46.1
Sample D Male 41.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.8
Samples: 4

Max nTPM: 50.7
Min nTPM: 42.3
Sample A Male 50.7
Sample B Male 47.7
Sample C Female 50.3
Sample D Female 42.3
Hippocampal formation
nTPM: 50.3
Samples: 4

Max nTPM: 54.8
Min nTPM: 46.7
Sample A Male 54.8
Sample B Male 50.3
Sample C Female 46.7
Sample D Female 49.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
69549249 Antisense, RP_050125_01_G02, Mouse strain C57BL/6J (56 days, male) 5.5

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