HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.1 nTPM
HPA Brain:45.7 nTPM
GTEx:20.1 nTPM
FANTOM5:110.9 Scaled Tags Per Million
Pig:54.9 nTPM
Mouse:68.5 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001170
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 39.3
2621 Female, age 67, right hemisphere 42.1
2529 Female, age 94, left hemisphere 41.0
2148 Female, age 91, left hemisphere 39.8
1898 Male, age 80, left hemisphere 39.4
1855 Male, age 76, left hemisphere 37.7
1911 Female, age 85, right hemisphere 35.8
Dentate gyrus
nTPM: 40.3
1927 Female, age 91, both hemispheres 45.3
2528 Male, age 74, both hemispheres 40.7
2010 Male, age 76, both hemispheres 40.4
2246 Female, age 85, both hemispheres 39.9
2531 Female, age 67, both hemispheres 39.6
2530 Female, age 94, left hemisphere 36.0
Entorhinal gyrus
nTPM: 41.0
1938 Female, age 85, left hemisphere 48.5
2764 Male, age 80, right hemisphere 46.4
1787 Male, age 76, left hemisphere 38.6
2117 Female, age 91, right hemisphere 38.5
2613 Female, age 94, left hemisphere 37.9
2686 Male, age 75, right hemisphere 36.2
Hippocampus, CA1
nTPM: 41.5
2749 Male, age 80, left hemisphere 46.1
1873 Female, age 85, both hemispheres 44.2
2527 Male, age 74, both hemispheres 43.0
2045 Male, age 76, both hemispheres 37.7
2082 Female, age 91, right hemisphere 36.2
Hippocampus, CA2
nTPM: 41.8
1963 Male, age 80, left hemisphere 52.7
2437 Female, age 94, left hemisphere 45.7
1892 Male, age 76, both hemispheres 42.7
2249 Male, age 74, both hemispheres 40.4
2113 Female, age 91, right hemisphere 36.5
1940 Female, age 85, left hemisphere 33.0
Hippocampus, CA3
nTPM: 40.1
2137 Male, age 80, left hemisphere 47.6
2436 Male, age 74, both hemispheres 44.3
1891 Female, age 85, both hemispheres 41.0
1867 Male, age 76, both hemispheres 40.1
2620 Female, age 94, left hemisphere 36.2
2861 Female, age 67, both hemispheres 31.2
Parahippocampal cortex
nTPM: 41.9
1850 Male, age 80, both hemispheres 47.4
2532 Female, age 72, left hemisphere 45.7
1933 Female, age 85, both hemispheres 45.3
2245 Female, age 91, both hemispheres 44.6
1990 Female, age 91, right hemisphere 42.9
2692 Male, age 74, both hemispheres 40.2
2018 Male, age 76, both hemispheres 39.9
2693 Female, age 94, both hemispheres 38.8
2250 Female, age 67, right hemisphere 38.6
2622 Female, age 67, right hemisphere 35.6
Perirhinal gyrus
nTPM: 45.7
1841 Female, age 85, right hemisphere 50.3
1847 Female, age 91, left hemisphere 48.8
1794 Male, age 80, right hemisphere 45.5
2848 Male, age 76, right hemisphere 43.4
2521 Female, age 94, right hemisphere 40.4
Subiculum
nTPM: 43.8
2438 Female, age 94, left hemisphere 54.3
1977 Female, age 85, both hemispheres 46.5
2619 Male, age 74, both hemispheres 45.8
1901 Male, age 80, both hemispheres 40.3
2042 Male, age 76, both hemispheres 39.6
2729 Female, age 91, right hemisphere 36.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 34.9
Min nTPM: 11.4
Std nTPM: 4.0
Median nTPM: 19.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 34.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 31.4
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 30.2
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 30.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 30.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 29.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 27.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 27.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 27.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.9
FF:10169-103B7 60 years, female 119.4
FF:10153-102I9 76 years, female 102.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.9
Pig sample Sample description nTPM
Subiculum
nTPM: 45.0
Samples: 4

Max nTPM: 59.2
Min nTPM: 37.7
Sample A Female 59.2
Sample B Female 44.7
Sample C Male 37.7
Sample D Male 38.4
Dorsal hippocampus
nTPM: 54.9
Samples: 4

Max nTPM: 73.5
Min nTPM: 42.6
Sample A Female 73.5
Sample B Female 53.6
Sample C Male 49.8
Sample D Male 42.6
Entorhinal cortex
nTPM: 44.0
Samples: 4

Max nTPM: 50.4
Min nTPM: 38.3
Sample A Female 44.6
Sample B Female 50.4
Sample C Male 42.8
Sample D Male 38.3
Ventral hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 51.3
Min nTPM: 34.3
Sample A Female 48.6
Sample B Female 34.3
Sample C Male 47.9
Sample D Male 51.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.9
Samples: 4

Max nTPM: 61.5
Min nTPM: 46.8
Sample A Male 56.4
Sample B Male 54.7
Sample C Female 61.5
Sample D Female 46.8
Hippocampal formation
nTPM: 68.5
Samples: 4

Max nTPM: 74.5
Min nTPM: 54.0
Sample A Male 71.3
Sample B Male 54.0
Sample C Female 74.2
Sample D Female 74.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69885588 Antisense, RP_050512_02_H10, Mouse strain C57BL/6J (56 days, male) 1.0

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