HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:3.2 nTPM
HPA Brain:15.3 nTPM
GTEx:3.2 nTPM
FANTOM5:9.7 Scaled Tags Per Million
Pig:16.4 nTPM
Mouse:11.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049558
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.7
2148 Female, age 91, left hemisphere 14.5
1911 Female, age 85, right hemisphere 13.3
2621 Female, age 67, right hemisphere 13.0
2529 Female, age 94, left hemisphere 12.0
1898 Male, age 80, left hemisphere 11.6
1855 Male, age 76, left hemisphere 11.5
Dentate gyrus
nTPM: 14.0
2531 Female, age 67, both hemispheres 16.6
2010 Male, age 76, both hemispheres 14.7
2530 Female, age 94, left hemisphere 14.5
1927 Female, age 91, both hemispheres 13.3
2246 Female, age 85, both hemispheres 12.9
2528 Male, age 74, both hemispheres 12.0
Entorhinal gyrus
nTPM: 13.6
2613 Female, age 94, left hemisphere 16.2
2117 Female, age 91, right hemisphere 14.9
2764 Male, age 80, right hemisphere 14.9
1787 Male, age 76, left hemisphere 12.9
2686 Male, age 75, right hemisphere 12.2
1938 Female, age 85, left hemisphere 10.7
Hippocampus, CA1
nTPM: 14.6
2045 Male, age 76, both hemispheres 18.0
2749 Male, age 80, left hemisphere 16.7
2082 Female, age 91, right hemisphere 13.4
1873 Female, age 85, both hemispheres 12.9
2527 Male, age 74, both hemispheres 12.3
Hippocampus, CA2
nTPM: 12.6
1892 Male, age 76, both hemispheres 13.7
2437 Female, age 94, left hemisphere 13.5
2113 Female, age 91, right hemisphere 13.0
1940 Female, age 85, left hemisphere 11.9
1963 Male, age 80, left hemisphere 11.9
2249 Male, age 74, both hemispheres 11.2
Hippocampus, CA3
nTPM: 15.3
2620 Female, age 94, left hemisphere 19.4
1867 Male, age 76, both hemispheres 16.8
2861 Female, age 67, both hemispheres 16.4
2137 Male, age 80, left hemisphere 15.2
1891 Female, age 85, both hemispheres 12.7
2436 Male, age 74, both hemispheres 11.4
Parahippocampal cortex
nTPM: 12.6
2693 Female, age 94, both hemispheres 13.9
1990 Female, age 91, right hemisphere 13.6
2018 Male, age 76, both hemispheres 13.4
2532 Female, age 72, left hemisphere 13.3
2245 Female, age 91, both hemispheres 12.9
2622 Female, age 67, right hemisphere 12.4
1933 Female, age 85, both hemispheres 12.0
2692 Male, age 74, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.5
1850 Male, age 80, both hemispheres 10.9
Perirhinal gyrus
nTPM: 12.9
2521 Female, age 94, right hemisphere 15.0
2848 Male, age 76, right hemisphere 12.9
1794 Male, age 80, right hemisphere 12.8
1847 Female, age 91, left hemisphere 12.2
1841 Female, age 85, right hemisphere 11.6
Subiculum
nTPM: 13.3
2042 Male, age 76, both hemispheres 14.6
2729 Female, age 91, right hemisphere 13.5
1901 Male, age 80, both hemispheres 13.3
1977 Female, age 85, both hemispheres 13.3
2438 Female, age 94, left hemisphere 12.7
2619 Male, age 74, both hemispheres 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.2
Samples: 197

Max nTPM: 6.1
Min nTPM: 0.9
Std nTPM: 0.8
Median nTPM: 3.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 6.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 5.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 5.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 5.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 5.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 5.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 5.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 4.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 4.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 4.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 4.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.7
FF:10153-102I9 76 years, female 11.2
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.4
Pig sample Sample description nTPM
Subiculum
nTPM: 6.0
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.1
Sample A Female 7.0
Sample B Female 6.2
Sample C Male 5.6
Sample D Male 5.1
Dorsal hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 10.1
Sample A Female 21.5
Sample B Female 18.0
Sample C Male 10.1
Sample D Male 16.0
Entorhinal cortex
nTPM: 6.8
Samples: 4

Max nTPM: 7.6
Min nTPM: 5.6
Sample A Female 6.7
Sample B Female 5.6
Sample C Male 7.6
Sample D Male 7.1
Ventral hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 14.6
Min nTPM: 5.7
Sample A Female 8.1
Sample B Female 5.7
Sample C Male 9.1
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.8
Sample A Male 12.2
Sample B Male 12.1
Sample C Female 10.8
Sample D Female 11.2
Hippocampal formation
nTPM: 11.4
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.5
Sample A Male 10.5
Sample B Male 11.4
Sample C Female 12.2
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
532730 Antisense, RP_040825_01_H04, Mouse strain C57BL/6J (56 days, male) 0.0

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