HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:121.2 nTPM
HPA Brain:145.2 nTPM
GTEx:121.2 nTPM
FANTOM5:126.7 Scaled Tags Per Million
Pig:0.3 nTPM
Mouse:89.6 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029199
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 145.2
Sample id Sample description nTPM
Hippocampus
nTPM: 105.4
1898 Male, age 80, left hemisphere 136.2
1855 Male, age 76, left hemisphere 106.1
2621 Female, age 67, right hemisphere 105.7
2148 Female, age 91, left hemisphere 99.6
2529 Female, age 94, left hemisphere 94.5
1911 Female, age 85, right hemisphere 90.5
Dentate gyrus
nTPM: 109.3
1927 Female, age 91, both hemispheres 141.9
2010 Male, age 76, both hemispheres 114.4
2246 Female, age 85, both hemispheres 105.5
2530 Female, age 94, left hemisphere 104.9
2528 Male, age 74, both hemispheres 101.9
2531 Female, age 67, both hemispheres 87.4
Entorhinal gyrus
nTPM: 114.1
2764 Male, age 80, right hemisphere 137.6
1938 Female, age 85, left hemisphere 127.8
1787 Male, age 76, left hemisphere 123.7
2613 Female, age 94, left hemisphere 104.5
2117 Female, age 91, right hemisphere 99.6
2686 Male, age 75, right hemisphere 91.4
Hippocampus, CA1
nTPM: 119.9
2749 Male, age 80, left hemisphere 158.2
1873 Female, age 85, both hemispheres 114.7
2045 Male, age 76, both hemispheres 114.5
2082 Female, age 91, right hemisphere 106.8
2527 Male, age 74, both hemispheres 105.3
Hippocampus, CA2
nTPM: 113.7
1892 Male, age 76, both hemispheres 140.7
1963 Male, age 80, left hemisphere 129.7
2249 Male, age 74, both hemispheres 119.6
2437 Female, age 94, left hemisphere 99.0
2113 Female, age 91, right hemisphere 97.4
1940 Female, age 85, left hemisphere 95.7
Hippocampus, CA3
nTPM: 106.9
1867 Male, age 76, both hemispheres 126.3
2137 Male, age 80, left hemisphere 122.1
2436 Male, age 74, both hemispheres 116.2
2620 Female, age 94, left hemisphere 107.3
1891 Female, age 85, both hemispheres 91.8
2861 Female, age 67, both hemispheres 77.5
Parahippocampal cortex
nTPM: 113.3
1850 Male, age 80, both hemispheres 138.5
1990 Female, age 91, right hemisphere 128.7
1933 Female, age 85, both hemispheres 128.0
2245 Female, age 91, both hemispheres 122.4
2250 Female, age 67, right hemisphere 121.1
2532 Female, age 72, left hemisphere 118.0
2018 Male, age 76, both hemispheres 104.0
2693 Female, age 94, both hemispheres 103.0
2622 Female, age 67, right hemisphere 89.6
2692 Male, age 74, both hemispheres 79.4
Perirhinal gyrus
nTPM: 145.2
1847 Female, age 91, left hemisphere 169.8
1794 Male, age 80, right hemisphere 155.3
1841 Female, age 85, right hemisphere 153.0
2521 Female, age 94, right hemisphere 125.9
2848 Male, age 76, right hemisphere 122.0
Subiculum
nTPM: 103.8
1977 Female, age 85, both hemispheres 128.2
1901 Male, age 80, both hemispheres 108.5
2438 Female, age 94, left hemisphere 99.7
2619 Male, age 74, both hemispheres 97.9
2042 Male, age 76, both hemispheres 95.1
2729 Female, age 91, right hemisphere 93.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 121.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 121.2
Samples: 197

Max nTPM: 242.0
Min nTPM: 63.8
Std nTPM: 33.4
Median nTPM: 113.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 242.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 223.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 206.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 203.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 192.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 191.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 184.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 183.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 182.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 181.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 180.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.7
FF:10169-103B7 60 years, female 148.5
FF:10153-102I9 76 years, female 104.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.3
Pig sample Sample description nTPM
Subiculum
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.2
Sample C Male 0.0
Sample D Male 0.0
Dorsal hippocampus
nTPM: 0.3
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.2
Sample A Female 0.2
Sample B Female 0.5
Sample C Male 0.2
Sample D Male 0.3
Entorhinal cortex
nTPM: 0.3
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.0
Sample A Female 0.7
Sample B Female 0.4
Sample C Male 0.0
Sample D Male 0.2
Ventral hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.2
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 89.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.8
Samples: 4

Max nTPM: 87.6
Min nTPM: 78.2
Sample A Male 78.2
Sample B Male 83.8
Sample C Female 87.6
Sample D Female 81.6
Hippocampal formation
nTPM: 89.6
Samples: 4

Max nTPM: 97.7
Min nTPM: 80.7
Sample A Male 97.7
Sample B Male 80.7
Sample C Female 89.9
Sample D Female 90.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
68633125 Antisense, RP_050125_02_D11, Mouse strain C57BL/6J (56 days, male) 2.9

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