HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:21.3 nTPM
HPA Brain:30.5 nTPM
GTEx:21.3 nTPM
FANTOM5:40.0 Scaled Tags Per Million
Pig:16.8 nTPM
Mouse:6.5 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062626
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.5
Sample id Sample description nTPM
Hippocampus
nTPM: 26.3
2148 Female, age 91, left hemisphere 27.9
1855 Male, age 76, left hemisphere 27.5
1898 Male, age 80, left hemisphere 26.7
2529 Female, age 94, left hemisphere 26.6
2621 Female, age 67, right hemisphere 24.7
1911 Female, age 85, right hemisphere 24.5
Dentate gyrus
nTPM: 26.8
2528 Male, age 74, both hemispheres 31.1
2531 Female, age 67, both hemispheres 28.6
2530 Female, age 94, left hemisphere 27.1
2246 Female, age 85, both hemispheres 26.8
2010 Male, age 76, both hemispheres 25.0
1927 Female, age 91, both hemispheres 22.3
Entorhinal gyrus
nTPM: 30.5
2613 Female, age 94, left hemisphere 35.2
2117 Female, age 91, right hemisphere 33.3
2764 Male, age 80, right hemisphere 32.0
1787 Male, age 76, left hemisphere 30.7
1938 Female, age 85, left hemisphere 26.0
2686 Male, age 75, right hemisphere 26.0
Hippocampus, CA1
nTPM: 25.4
2082 Female, age 91, right hemisphere 29.5
2527 Male, age 74, both hemispheres 27.9
1873 Female, age 85, both hemispheres 25.3
2045 Male, age 76, both hemispheres 25.3
2749 Male, age 80, left hemisphere 19.3
Hippocampus, CA2
nTPM: 27.6
2437 Female, age 94, left hemisphere 30.0
1940 Female, age 85, left hemisphere 29.7
2249 Male, age 74, both hemispheres 29.5
2113 Female, age 91, right hemisphere 28.3
1963 Male, age 80, left hemisphere 25.5
1892 Male, age 76, both hemispheres 22.8
Hippocampus, CA3
nTPM: 27.4
2436 Male, age 74, both hemispheres 34.8
2620 Female, age 94, left hemisphere 33.1
2861 Female, age 67, both hemispheres 28.5
1867 Male, age 76, both hemispheres 25.1
1891 Female, age 85, both hemispheres 24.2
2137 Male, age 80, left hemisphere 19.0
Parahippocampal cortex
nTPM: 26.7
2622 Female, age 67, right hemisphere 29.3
1990 Female, age 91, right hemisphere 29.2
2250 Female, age 67, right hemisphere 28.3
1933 Female, age 85, both hemispheres 26.5
2018 Male, age 76, both hemispheres 26.4
2532 Female, age 72, left hemisphere 26.4
2692 Male, age 74, both hemispheres 26.2
2245 Female, age 91, both hemispheres 25.1
1850 Male, age 80, both hemispheres 24.9
2693 Female, age 94, both hemispheres 24.9
Perirhinal gyrus
nTPM: 26.9
1794 Male, age 80, right hemisphere 29.4
1847 Female, age 91, left hemisphere 27.1
2521 Female, age 94, right hemisphere 26.6
2848 Male, age 76, right hemisphere 26.1
1841 Female, age 85, right hemisphere 25.1
Subiculum
nTPM: 27.6
2619 Male, age 74, both hemispheres 30.4
2729 Female, age 91, right hemisphere 30.0
1977 Female, age 85, both hemispheres 29.3
2042 Male, age 76, both hemispheres 27.1
1901 Male, age 80, both hemispheres 24.4
2438 Female, age 94, left hemisphere 24.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.3
Samples: 197

Max nTPM: 36.6
Min nTPM: 11.2
Std nTPM: 4.1
Median nTPM: 21.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 36.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 31.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 31.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 31.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 30.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 29.6
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 29.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 29.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.0
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 39.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.8
Pig sample Sample description nTPM
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 20.1
Min nTPM: 14.1
Sample A Female 20.1
Sample B Female 15.9
Sample C Male 16.7
Sample D Male 14.1
Dorsal hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 19.7
Min nTPM: 11.5
Sample A Female 19.1
Sample B Female 14.7
Sample C Male 19.7
Sample D Male 11.5
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.7
Sample A Female 16.0
Sample B Female 13.3
Sample C Male 16.3
Sample D Male 12.7
Ventral hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 22.7
Min nTPM: 12.1
Sample A Female 16.9
Sample B Female 12.1
Sample C Male 22.7
Sample D Male 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.2
Sample A Male 6.5
Sample B Male 4.2
Sample C Female 4.2
Sample D Female 5.8
Hippocampal formation
nTPM: 6.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.4
Sample A Male 5.4
Sample B Male 6.1
Sample C Female 6.3
Sample D Female 8.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69524554 Antisense, RP_050419_04_E12, Mouse strain C57BL/6J (56 days, male) 0.4

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