HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:184.0 nTPM
HPA Brain:152.2 nTPM
GTEx:184.0 nTPM
FANTOM5:152.2 Scaled Tags Per Million
Pig:28.0 nTPM
Mouse:35.6 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038091
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 152.2
Sample id Sample description nTPM
Hippocampus
nTPM: 152.2
2148 Female, age 91, left hemisphere 176.5
1855 Male, age 76, left hemisphere 165.1
1911 Female, age 85, right hemisphere 157.1
2621 Female, age 67, right hemisphere 155.5
1898 Male, age 80, left hemisphere 142.5
2529 Female, age 94, left hemisphere 116.3
Dentate gyrus
nTPM: 151.7
2531 Female, age 67, both hemispheres 164.0
2010 Male, age 76, both hemispheres 158.3
1927 Female, age 91, both hemispheres 152.3
2246 Female, age 85, both hemispheres 148.9
2528 Male, age 74, both hemispheres 144.8
2530 Female, age 94, left hemisphere 142.2
Entorhinal gyrus
nTPM: 149.3
2686 Male, age 75, right hemisphere 160.5
2613 Female, age 94, left hemisphere 158.2
2764 Male, age 80, right hemisphere 157.4
2117 Female, age 91, right hemisphere 147.8
1787 Male, age 76, left hemisphere 139.1
1938 Female, age 85, left hemisphere 133.0
Hippocampus, CA1
nTPM: 150.9
1873 Female, age 85, both hemispheres 177.7
2045 Male, age 76, both hemispheres 163.7
2082 Female, age 91, right hemisphere 148.0
2527 Male, age 74, both hemispheres 136.5
2749 Male, age 80, left hemisphere 128.6
Hippocampus, CA2
nTPM: 143.0
1963 Male, age 80, left hemisphere 158.9
1940 Female, age 85, left hemisphere 157.8
1892 Male, age 76, both hemispheres 152.7
2113 Female, age 91, right hemisphere 141.0
2249 Male, age 74, both hemispheres 133.0
2437 Female, age 94, left hemisphere 114.9
Hippocampus, CA3
nTPM: 149.9
2620 Female, age 94, left hemisphere 206.2
2861 Female, age 67, both hemispheres 175.2
1891 Female, age 85, both hemispheres 160.0
1867 Male, age 76, both hemispheres 149.9
2137 Male, age 80, left hemisphere 108.4
2436 Male, age 74, both hemispheres 99.5
Parahippocampal cortex
nTPM: 133.1
2692 Male, age 74, both hemispheres 160.5
2622 Female, age 67, right hemisphere 150.5
2693 Female, age 94, both hemispheres 139.5
2018 Male, age 76, both hemispheres 137.7
2532 Female, age 72, left hemisphere 132.6
1990 Female, age 91, right hemisphere 130.4
1933 Female, age 85, both hemispheres 129.9
1850 Male, age 80, both hemispheres 124.8
2245 Female, age 91, both hemispheres 118.8
2250 Female, age 67, right hemisphere 106.4
Perirhinal gyrus
nTPM: 114.4
2521 Female, age 94, right hemisphere 126.3
1847 Female, age 91, left hemisphere 121.0
2848 Male, age 76, right hemisphere 117.9
1794 Male, age 80, right hemisphere 103.7
1841 Female, age 85, right hemisphere 103.3
Subiculum
nTPM: 146.4
2042 Male, age 76, both hemispheres 176.3
2729 Female, age 91, right hemisphere 166.1
1901 Male, age 80, both hemispheres 149.2
1977 Female, age 85, both hemispheres 144.3
2619 Male, age 74, both hemispheres 132.5
2438 Female, age 94, left hemisphere 109.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 184.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.0
Samples: 197

Max nTPM: 420.8
Min nTPM: 43.4
Std nTPM: 58.7
Median nTPM: 181.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 420.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 362.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 330.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 329.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 324.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 322.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 307.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 305.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 296.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 282.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 280.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.2
FF:10153-102I9 76 years, female 193.3
FF:10169-103B7 60 years, female 111.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.0
Pig sample Sample description nTPM
Subiculum
nTPM: 23.6
Samples: 4

Max nTPM: 27.1
Min nTPM: 22.2
Sample A Female 27.1
Sample B Female 22.2
Sample C Male 22.5
Sample D Male 22.5
Dorsal hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 32.1
Min nTPM: 22.5
Sample A Female 32.1
Sample B Female 29.5
Sample C Male 27.9
Sample D Male 22.5
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 31.2
Min nTPM: 25.1
Sample A Female 25.1
Sample B Female 27.5
Sample C Male 28.3
Sample D Male 31.2
Ventral hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 38.4
Min nTPM: 20.1
Sample A Female 21.4
Sample B Female 20.1
Sample C Male 27.6
Sample D Male 38.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 31.6
Min nTPM: 24.3
Sample A Male 31.6
Sample B Male 29.5
Sample C Female 29.5
Sample D Female 24.3
Hippocampal formation
nTPM: 35.6
Samples: 4

Max nTPM: 43.7
Min nTPM: 30.0
Sample A Male 30.0
Sample B Male 34.7
Sample C Female 43.7
Sample D Female 33.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
76003377 Antisense, RP_060608_02_D04, Mouse strain C57BL/6J (56 days, male) 3.3

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