HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:68.7 nTPM
HPA Brain:91.0 nTPM
GTEx:68.7 nTPM
FANTOM5:45.5 Scaled Tags Per Million
Pig:29.9 nTPM
Mouse:139.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018459
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.0
Sample id Sample description nTPM
Hippocampus
nTPM: 83.7
2621 Female, age 67, right hemisphere 105.2
2148 Female, age 91, left hemisphere 100.1
1898 Male, age 80, left hemisphere 83.8
1855 Male, age 76, left hemisphere 78.9
1911 Female, age 85, right hemisphere 73.9
2529 Female, age 94, left hemisphere 60.1
Dentate gyrus
nTPM: 88.4
1927 Female, age 91, both hemispheres 112.5
2531 Female, age 67, both hemispheres 100.0
2530 Female, age 94, left hemisphere 87.8
2010 Male, age 76, both hemispheres 86.8
2528 Male, age 74, both hemispheres 77.0
2246 Female, age 85, both hemispheres 66.3
Entorhinal gyrus
nTPM: 74.3
2613 Female, age 94, left hemisphere 96.0
2686 Male, age 75, right hemisphere 78.8
2764 Male, age 80, right hemisphere 78.8
1938 Female, age 85, left hemisphere 73.2
1787 Male, age 76, left hemisphere 68.9
2117 Female, age 91, right hemisphere 50.3
Hippocampus, CA1
nTPM: 90.2
2749 Male, age 80, left hemisphere 134.4
1873 Female, age 85, both hemispheres 91.1
2045 Male, age 76, both hemispheres 77.1
2082 Female, age 91, right hemisphere 76.4
2527 Male, age 74, both hemispheres 71.8
Hippocampus, CA2
nTPM: 82.1
1963 Male, age 80, left hemisphere 121.3
1892 Male, age 76, both hemispheres 100.5
2249 Male, age 74, both hemispheres 70.3
2113 Female, age 91, right hemisphere 68.5
1940 Female, age 85, left hemisphere 67.9
2437 Female, age 94, left hemisphere 64.0
Hippocampus, CA3
nTPM: 91.0
2861 Female, age 67, both hemispheres 130.6
2620 Female, age 94, left hemisphere 102.6
2137 Male, age 80, left hemisphere 101.2
1867 Male, age 76, both hemispheres 77.9
2436 Male, age 74, both hemispheres 70.4
1891 Female, age 85, both hemispheres 63.2
Parahippocampal cortex
nTPM: 69.2
2245 Female, age 91, both hemispheres 81.7
1933 Female, age 85, both hemispheres 80.5
2622 Female, age 67, right hemisphere 78.3
2693 Female, age 94, both hemispheres 74.6
1850 Male, age 80, both hemispheres 72.3
2250 Female, age 67, right hemisphere 66.9
2692 Male, age 74, both hemispheres 61.2
1990 Female, age 91, right hemisphere 60.4
2018 Male, age 76, both hemispheres 60.3
2532 Female, age 72, left hemisphere 55.8
Perirhinal gyrus
nTPM: 77.9
1847 Female, age 91, left hemisphere 92.5
2521 Female, age 94, right hemisphere 90.1
1794 Male, age 80, right hemisphere 74.9
1841 Female, age 85, right hemisphere 66.1
2848 Male, age 76, right hemisphere 65.8
Subiculum
nTPM: 60.1
1901 Male, age 80, both hemispheres 70.1
1977 Female, age 85, both hemispheres 65.5
2729 Female, age 91, right hemisphere 63.9
2042 Male, age 76, both hemispheres 60.5
2619 Male, age 74, both hemispheres 56.6
2438 Female, age 94, left hemisphere 44.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.7
Samples: 197

Max nTPM: 158.4
Min nTPM: 14.3
Std nTPM: 26.7
Median nTPM: 66.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 158.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 135.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 129.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 128.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 127.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 126.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 125.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 123.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 122.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 119.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 117.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.5
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 39.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.9
Pig sample Sample description nTPM
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 39.3
Min nTPM: 25.7
Sample A Female 39.3
Sample B Female 25.7
Sample C Male 28.0
Sample D Male 26.7
Dorsal hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 33.3
Min nTPM: 19.5
Sample A Female 33.3
Sample B Female 28.1
Sample C Male 32.2
Sample D Male 19.5
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 34.5
Min nTPM: 26.8
Sample A Female 27.3
Sample B Female 29.0
Sample C Male 34.5
Sample D Male 26.8
Ventral hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 36.7
Min nTPM: 22.0
Sample A Female 26.3
Sample B Female 22.0
Sample C Male 36.7
Sample D Male 31.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 139.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 139.2
Samples: 4

Max nTPM: 150.5
Min nTPM: 120.2
Sample A Male 139.3
Sample B Male 150.5
Sample C Female 146.7
Sample D Female 120.2
Hippocampal formation
nTPM: 116.3
Samples: 4

Max nTPM: 120.7
Min nTPM: 109.2
Sample A Male 120.1
Sample B Male 109.2
Sample C Female 115.0
Sample D Female 120.7

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