HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.0 nTPM
HPA Brain:34.7 nTPM
GTEx:15.0 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Pig:19.5 nTPM
Mouse:18.4 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 33.3
2148 Female, age 91, left hemisphere 38.0
1898 Male, age 80, left hemisphere 36.5
2621 Female, age 67, right hemisphere 36.5
2529 Female, age 94, left hemisphere 36.3
1855 Male, age 76, left hemisphere 26.8
1911 Female, age 85, right hemisphere 26.0
Dentate gyrus
nTPM: 32.7
2528 Male, age 74, both hemispheres 38.7
1927 Female, age 91, both hemispheres 37.1
2530 Female, age 94, left hemisphere 36.6
2531 Female, age 67, both hemispheres 30.7
2010 Male, age 76, both hemispheres 28.6
2246 Female, age 85, both hemispheres 24.6
Entorhinal gyrus
nTPM: 29.1
2117 Female, age 91, right hemisphere 34.1
1787 Male, age 76, left hemisphere 31.4
2764 Male, age 80, right hemisphere 28.9
2613 Female, age 94, left hemisphere 28.1
2686 Male, age 75, right hemisphere 27.3
1938 Female, age 85, left hemisphere 24.8
Hippocampus, CA1
nTPM: 33.0
2749 Male, age 80, left hemisphere 48.2
2527 Male, age 74, both hemispheres 36.8
1873 Female, age 85, both hemispheres 31.0
2082 Female, age 91, right hemisphere 28.6
2045 Male, age 76, both hemispheres 20.4
Hippocampus, CA2
nTPM: 34.7
1963 Male, age 80, left hemisphere 53.5
1892 Male, age 76, both hemispheres 34.6
2437 Female, age 94, left hemisphere 33.5
2249 Male, age 74, both hemispheres 33.3
2113 Female, age 91, right hemisphere 32.7
1940 Female, age 85, left hemisphere 20.6
Hippocampus, CA3
nTPM: 33.8
2137 Male, age 80, left hemisphere 40.9
2861 Female, age 67, both hemispheres 38.1
2436 Male, age 74, both hemispheres 34.7
2620 Female, age 94, left hemisphere 32.9
1867 Male, age 76, both hemispheres 31.4
1891 Female, age 85, both hemispheres 25.1
Parahippocampal cortex
nTPM: 28.3
2245 Female, age 91, both hemispheres 34.6
1990 Female, age 91, right hemisphere 31.7
2250 Female, age 67, right hemisphere 30.1
2692 Male, age 74, both hemispheres 30.1
1850 Male, age 80, both hemispheres 27.3
1933 Female, age 85, both hemispheres 27.1
2693 Female, age 94, both hemispheres 27.0
2622 Female, age 67, right hemisphere 26.1
2018 Male, age 76, both hemispheres 24.8
2532 Female, age 72, left hemisphere 24.8
Perirhinal gyrus
nTPM: 28.6
1847 Female, age 91, left hemisphere 33.8
2521 Female, age 94, right hemisphere 31.9
1794 Male, age 80, right hemisphere 29.9
1841 Female, age 85, right hemisphere 25.0
2848 Male, age 76, right hemisphere 22.5
Subiculum
nTPM: 28.8
2729 Female, age 91, right hemisphere 34.7
2619 Male, age 74, both hemispheres 33.7
1901 Male, age 80, both hemispheres 30.2
1977 Female, age 85, both hemispheres 26.1
2438 Female, age 94, left hemisphere 25.7
2042 Male, age 76, both hemispheres 22.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 27.9
Min nTPM: 6.0
Std nTPM: 4.4
Median nTPM: 14.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 27.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 26.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 26.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 25.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 25.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 25.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 24.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 24.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 23.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 22.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.8
FF:10153-102I9 76 years, female 24.2
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.5
Pig sample Sample description nTPM
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.6
Sample A Female 18.6
Sample B Female 13.6
Sample C Male 17.2
Sample D Male 14.5
Dorsal hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 16.2
Min nTPM: 14.6
Sample A Female 16.2
Sample B Female 14.6
Sample C Male 15.6
Sample D Male 14.8
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 22.3
Min nTPM: 17.0
Sample A Female 17.0
Sample B Female 18.2
Sample C Male 22.3
Sample D Male 20.3
Ventral hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 21.8
Min nTPM: 12.1
Sample A Female 13.2
Sample B Female 12.1
Sample C Male 21.8
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.6
Sample A Male 20.2
Sample B Male 18.1
Sample C Female 17.6
Sample D Female 17.9
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.9
Sample A Male 16.9
Sample B Male 15.6
Sample C Female 14.9
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69548852 Antisense, RP_050426_02_D08, Mouse strain C57BL/6J (56 days, male) 1.1
72472765 Antisense, RP_051101_02_C11, Mouse strain C57BL/6J (56 days, male) 0.8

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