HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:2.9 nTPM
HPA Brain:25.0 nTPM
GTEx:2.9 nTPM
FANTOM5:6.6 Scaled Tags Per Million
Pig:14.9 nTPM
Mouse:23.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059605
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 15.2
2621 Female, age 67, right hemisphere 17.8
1898 Male, age 80, left hemisphere 16.7
1855 Male, age 76, left hemisphere 15.8
1911 Female, age 85, right hemisphere 15.6
2148 Female, age 91, left hemisphere 14.1
2529 Female, age 94, left hemisphere 11.4
Dentate gyrus
nTPM: 17.0
2528 Male, age 74, both hemispheres 21.0
2246 Female, age 85, both hemispheres 18.5
2531 Female, age 67, both hemispheres 17.9
2530 Female, age 94, left hemisphere 16.4
2010 Male, age 76, both hemispheres 15.2
1927 Female, age 91, both hemispheres 12.8
Entorhinal gyrus
nTPM: 18.2
2764 Male, age 80, right hemisphere 24.2
2686 Male, age 75, right hemisphere 20.0
1938 Female, age 85, left hemisphere 19.6
1787 Male, age 76, left hemisphere 17.5
2613 Female, age 94, left hemisphere 15.9
2117 Female, age 91, right hemisphere 12.2
Hippocampus, CA1
nTPM: 18.8
2749 Male, age 80, left hemisphere 23.6
2082 Female, age 91, right hemisphere 21.4
2045 Male, age 76, both hemispheres 18.6
1873 Female, age 85, both hemispheres 15.7
2527 Male, age 74, both hemispheres 14.7
Hippocampus, CA2
nTPM: 17.0
1963 Male, age 80, left hemisphere 20.9
1940 Female, age 85, left hemisphere 19.2
2249 Male, age 74, both hemispheres 16.8
2113 Female, age 91, right hemisphere 16.4
1892 Male, age 76, both hemispheres 14.4
2437 Female, age 94, left hemisphere 14.4
Hippocampus, CA3
nTPM: 18.4
2620 Female, age 94, left hemisphere 25.2
1891 Female, age 85, both hemispheres 22.6
2137 Male, age 80, left hemisphere 22.0
2436 Male, age 74, both hemispheres 14.8
1867 Male, age 76, both hemispheres 13.4
2861 Female, age 67, both hemispheres 12.6
Parahippocampal cortex
nTPM: 20.0
1933 Female, age 85, both hemispheres 24.3
1850 Male, age 80, both hemispheres 23.9
2693 Female, age 94, both hemispheres 23.6
2245 Female, age 91, both hemispheres 21.6
1990 Female, age 91, right hemisphere 19.4
2018 Male, age 76, both hemispheres 18.8
2250 Female, age 67, right hemisphere 18.7
2622 Female, age 67, right hemisphere 18.5
2692 Male, age 74, both hemispheres 15.9
2532 Female, age 72, left hemisphere 15.0
Perirhinal gyrus
nTPM: 25.0
1841 Female, age 85, right hemisphere 31.9
2848 Male, age 76, right hemisphere 26.1
1794 Male, age 80, right hemisphere 23.8
2521 Female, age 94, right hemisphere 22.5
1847 Female, age 91, left hemisphere 20.9
Subiculum
nTPM: 19.5
2729 Female, age 91, right hemisphere 22.8
1901 Male, age 80, both hemispheres 20.5
2042 Male, age 76, both hemispheres 19.4
2438 Female, age 94, left hemisphere 19.1
1977 Female, age 85, both hemispheres 18.5
2619 Male, age 74, both hemispheres 16.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.9
Samples: 197

Max nTPM: 22.4
Min nTPM: 0.0
Std nTPM: 2.5
Median nTPM: 2.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 22.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 19.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 10.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 9.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 9.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 8.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 8.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 7.6
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 6.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 6.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 5.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.6
FF:10169-103B7 60 years, female 11.4
FF:10153-102I9 76 years, female 1.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.9
Pig sample Sample description nTPM
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 13.7
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 13.7
Sample C Male 13.0
Sample D Male 13.1
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.3
Sample A Female 11.4
Sample B Female 15.2
Sample C Male 10.3
Sample D Male 14.1
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 15.7
Min nTPM: 14.1
Sample A Female 14.2
Sample B Female 15.7
Sample C Male 14.1
Sample D Male 15.7
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 17.5
Min nTPM: 8.6
Sample A Female 11.6
Sample B Female 15.1
Sample C Male 8.6
Sample D Male 17.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 28.9
Min nTPM: 19.2
Sample A Male 26.8
Sample B Male 28.9
Sample C Female 19.3
Sample D Female 19.2
Hippocampal formation
nTPM: 17.2
Samples: 4

Max nTPM: 21.2
Min nTPM: 12.5
Sample A Male 21.2
Sample B Male 19.0
Sample C Female 12.5
Sample D Female 16.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69540701 Antisense, RP_050426_02_C08, Mouse strain C57BL/6J (56 days, male) 0.1

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