HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.3 nTPM
HPA Brain:29.4 nTPM
GTEx:15.3 nTPM
FANTOM5:68.4 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:9.0 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.4
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
1898 Male, age 80, left hemisphere 24.7
1855 Male, age 76, left hemisphere 24.5
2529 Female, age 94, left hemisphere 23.8
1911 Female, age 85, right hemisphere 23.5
2621 Female, age 67, right hemisphere 23.2
2148 Female, age 91, left hemisphere 18.1
Dentate gyrus
nTPM: 23.1
2530 Female, age 94, left hemisphere 34.8
2010 Male, age 76, both hemispheres 26.2
2528 Male, age 74, both hemispheres 22.8
2246 Female, age 85, both hemispheres 20.2
2531 Female, age 67, both hemispheres 18.0
1927 Female, age 91, both hemispheres 16.4
Entorhinal gyrus
nTPM: 23.3
2117 Female, age 91, right hemisphere 33.9
1787 Male, age 76, left hemisphere 25.3
2764 Male, age 80, right hemisphere 24.4
1938 Female, age 85, left hemisphere 21.9
2686 Male, age 75, right hemisphere 17.7
2613 Female, age 94, left hemisphere 16.9
Hippocampus, CA1
nTPM: 19.8
1873 Female, age 85, both hemispheres 21.4
2082 Female, age 91, right hemisphere 21.0
2527 Male, age 74, both hemispheres 20.8
2749 Male, age 80, left hemisphere 18.3
2045 Male, age 76, both hemispheres 17.4
Hippocampus, CA2
nTPM: 24.1
1892 Male, age 76, both hemispheres 25.8
2249 Male, age 74, both hemispheres 25.1
2437 Female, age 94, left hemisphere 24.8
1963 Male, age 80, left hemisphere 24.3
2113 Female, age 91, right hemisphere 23.6
1940 Female, age 85, left hemisphere 21.0
Hippocampus, CA3
nTPM: 17.7
1891 Female, age 85, both hemispheres 27.3
1867 Male, age 76, both hemispheres 25.2
2436 Male, age 74, both hemispheres 16.7
2137 Male, age 80, left hemisphere 14.1
2861 Female, age 67, both hemispheres 14.1
2620 Female, age 94, left hemisphere 9.1
Parahippocampal cortex
nTPM: 19.7
2532 Female, age 72, left hemisphere 23.9
2018 Male, age 76, both hemispheres 23.7
1990 Female, age 91, right hemisphere 23.3
2692 Male, age 74, both hemispheres 23.3
1850 Male, age 80, both hemispheres 19.7
1933 Female, age 85, both hemispheres 19.1
2245 Female, age 91, both hemispheres 19.0
2250 Female, age 67, right hemisphere 17.9
2693 Female, age 94, both hemispheres 14.4
2622 Female, age 67, right hemisphere 12.6
Perirhinal gyrus
nTPM: 17.6
2848 Male, age 76, right hemisphere 21.2
1841 Female, age 85, right hemisphere 18.3
1847 Female, age 91, left hemisphere 16.9
1794 Male, age 80, right hemisphere 16.1
2521 Female, age 94, right hemisphere 15.5
Subiculum
nTPM: 29.4
2042 Male, age 76, both hemispheres 36.9
1901 Male, age 80, both hemispheres 33.5
2438 Female, age 94, left hemisphere 32.3
1977 Female, age 85, both hemispheres 28.6
2619 Male, age 74, both hemispheres 23.2
2729 Female, age 91, right hemisphere 21.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 43.9
Min nTPM: 4.8
Std nTPM: 7.7
Median nTPM: 12.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 43.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 42.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 39.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 37.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 35.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 35.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 32.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 31.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 31.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.4
FF:10153-102I9 76 years, female 78.7
FF:10169-103B7 60 years, female 58.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.7
Pig sample Sample description nTPM
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 16.8
Min nTPM: 15.2
Sample A Female 16.8
Sample B Female 15.2
Sample C Male 15.5
Sample D Male 15.2
Dorsal hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 9.4
Sample A Female 15.7
Sample B Female 14.6
Sample C Male 18.1
Sample D Male 9.4
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.2
Sample A Female 14.4
Sample B Female 15.4
Sample C Male 15.6
Sample D Male 13.2
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.8
Sample A Female 15.0
Sample B Female 11.8
Sample C Male 17.1
Sample D Male 14.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 11.7
Min nTPM: 7.5
Sample A Male 7.5
Sample B Male 8.2
Sample C Female 8.4
Sample D Female 11.7
Hippocampal formation
nTPM: 8.7
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 8.5
Sample C Female 10.6
Sample D Female 8.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
74658175 Antisense, RP_060220_02_D03, Mouse strain C57BL/6J (56 days, male) 2.5
75692980 Antisense, RP_060220_02_D03, Mouse strain C57BL/6J (56 days, male) 1.6

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