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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
9.4
nTPM
HPA Brain:
53.4
nTPM
GTEx:
9.4
nTPM
FANTOM5:
41.2
Scaled Tags Per Million
Pig:
17.4
nTPM
Mouse:
64.7
nTPM
Allen mouse:
0.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
53.4
Sample id
Sample description
nTPM
Amygdala nTPM: 47.8
2814
Male, age 76, right hemisphere
53.8
2514
Male, age 75, right hemisphere
53.4
2517
Female, age 94, left hemisphere
46.1
2695
Female, age 67, right hemisphere
43.8
1987
Female, age 91, left hemisphere
41.8
Basal amygdala nTPM: 48.5
2685
Female, age 94, left hemisphere
52.9
2609
Male, age 75, right hemisphere
51.2
2243
Female, age 91, right hemisphere
49.6
1955
Male, age 76, both hemispheres
46.4
2110
Male, age 80, left hemisphere
46.1
2827
Female, age 67, right hemisphere
44.9
Central amygdala nTPM: 49.0
1905
Male, age 76, both hemispheres
58.3
2515
Male, age 75, right hemisphere
48.7
2701
Female, age 91, right hemisphere
47.3
2239
Male, age 80, left hemisphere
46.6
2826
Female, age 94, left hemisphere
44.2
Corticomedial amygdala nTPM: 53.4
2429
Female, age 94, left hemisphere
67.1
2428
Male, age 75, right hemisphere
61.3
2242
Female, age 91, right hemisphere
49.6
2240
Male, age 76, both hemispheres
49.3
2535
Female, age 67, right hemisphere
47.5
2829
Male, age 80, left hemisphere
45.5
Lateral amygdala nTPM: 49.2
2516
Male, age 75, right hemisphere
53.1
1883
Male, age 76, both hemispheres
52.7
2255
Female, age 91, right hemisphere
50.3
2534
Female, age 94, left hemisphere
50.0
2256
Male, age 80, left hemisphere
44.6
2830
Female, age 67, right hemisphere
44.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
9.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 9.4
Samples: 152
Max nTPM: 17.7
Min nTPM: 5.4
Std nTPM: 2.1
Median nTPM: 9.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
17.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
17.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
15.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
14.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
14.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
14.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
13.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
13.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
13.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
13.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
13.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
13.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
12.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
12.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
12.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
12.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
12.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
12.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
11.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
11.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
11.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
11.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
11.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
11.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
11.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
11.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
11.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
11.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
11.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
11.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
11.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
10.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
10.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
10.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
10.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
10.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
10.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
10.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
10.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
10.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
10.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
10.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
10.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
10.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
10.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
10.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
10.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
10.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
9.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
9.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
9.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
9.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
9.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
9.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
9.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
9.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
9.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
9.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
9.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
9.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
9.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
9.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
9.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
9.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
9.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
9.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
9.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
9.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
9.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
9.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
9.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
9.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
9.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
9.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
9.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
9.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
9.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
9.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
9.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
9.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
9.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
9.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
8.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
8.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
8.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
8.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
8.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
8.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
8.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
8.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
8.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
8.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
8.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
8.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
8.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
8.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
8.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
8.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
8.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
8.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
8.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
8.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
8.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
8.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
8.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
8.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
8.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
8.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
8.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
8.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
8.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
8.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
8.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
8.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
7.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
7.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
7.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
7.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
7.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
7.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
7.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
7.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
7.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
7.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
7.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
7.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
7.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
7.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
7.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
7.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
7.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
7.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
7.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
7.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
7.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
7.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
6.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
6.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
6.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
6.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
6.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
6.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
6.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
6.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
5.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
5.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
5.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
5.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
5.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
5.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
64.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 64.7
Samples: 4
Max nTPM: 73.2
Min nTPM: 55.8
Sample A
Male
73.2
Sample B
Male
66.5
Sample C
Female
55.8
Sample D
Female
63.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.