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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
117.5
nTPM
FANTOM5:
72.8
Scaled Tags Per Million
Pig:
29.2
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
117.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 90.6
2188
Female, age 91, both hemispheres
98.6
2301
Female, age 85, both hemispheres
90.8
1984
Male, age 76, both hemispheres
87.8
2090
Male, age 80, both hemispheres
85.1
Dorsal cochlear nucleus nTPM: 80.7
2187
Female, age 91, both hemispheres
89.2
2058
Male, age 76, both hemispheres
86.9
2802
Male, age 74, right hemisphere
81.5
2370
Male, age 61, both hemispheres
78.0
2378
Male, age 80, both hemispheres
68.0
Dorsal tegmental nucleus nTPM: 81.4
1936
Male, age 76, left hemisphere
87.0
2083
Male, age 80, both hemispheres
84.4
2326
Male, age 74, both hemispheres
79.4
2358
Male, age 61, both hemispheres
75.0
Dorsolateral tegmental area nTPM: 85.2
2141
Male, age 76, both hemispheres
100.0
2751
Female, age 85, both hemispheres
92.3
2654
Male, age 80, both hemispheres
81.5
2360
Male, age 74, both hemispheres
77.9
2337
Male, age 61, both hemispheres
74.4
Kolliker-Fuse nucleus nTPM: 86.9
2793
Female, age 91, left hemisphere
104.3
2163
Male, age 80, both hemispheres
90.5
2315
Male, age 76, right hemisphere
65.9
Lateral lemniscal nuclei nTPM: 107.4
2036
Male, age 80, both hemispheres
121.7
2169
Male, age 76, both hemispheres
114.1
2320
Female, age 91, left hemisphere
106.5
2453
Male, age 74, right hemisphere
102.3
2746
Female, age 85, left hemisphere
92.6
Lateral parabrachial nucleus nTPM: 89.9
2139
Female, age 85, right hemisphere
101.5
2790
Male, age 61, both hemispheres
97.2
2013
Male, age 80, both hemispheres
86.8
2792
Male, age 76, both hemispheres
74.1
Lateral vestibular nucleus nTPM: 81.5
2184
Male, age 76, both hemispheres
90.8
2311
Male, age 80, both hemispheres
72.2
Locus coeruleus nTPM: 97.3
2788
Male, age 74, unknown
108.2
2162
Male, age 80, both hemispheres
101.6
2720
Male, age 74, both hemispheres
99.1
2317
Female, age 72, unknown
96.2
2123
Female, age 91, both hemispheres
95.4
1980
Male, age 76, both hemispheres
90.5
2014
Male, age 55, unknown
90.4
Medial parabrachial nucleus nTPM: 89.8
2854
Male, age 80, both hemispheres
95.6
2156
Male, age 61, both hemispheres
92.6
2463
Female, age 85, right hemisphere
90.4
2170
Female, age 91, both hemispheres
89.0
2786
Male, age 76, both hemispheres
81.6
Medial periolivary nuclei nTPM: 104.6
2171
Female, age 85, both hemispheres
117.7
2063
Male, age 76, both hemispheres
109.9
2458
Female, age 91, both hemispheres
103.4
2081
Male, age 80, both hemispheres
97.1
2791
Male, age 74, right hemisphere
95.1
Motor facial nucleus nTPM: 99.6
2327
Male, age 80, both hemispheres
124.0
2697
Female, age 85, both hemispheres
110.1
2062
Male, age 76, both hemispheres
99.8
2365
Male, age 74, right hemisphere
97.3
2795
Female, age 91, both hemispheres
85.2
2126
Male, age 61, both hemispheres
80.8
Motor trigeminal nucleus nTPM: 101.2
2560
Male, age 74, both hemispheres
115.1
2079
Male, age 80, both hemispheres
114.4
2335
Male, age 61, both hemispheres
100.6
2321
Female, age 91, both hemispheres
89.1
2309
Male, age 76, both hemispheres
86.8
Nuclei of the trapezoid body nTPM: 117.5
2159
Male, age 61, both hemispheres
167.0
2166
Male, age 80, both hemispheres
117.0
2735
Female, age 85, both hemispheres
112.3
2368
Female, age 91, both hemispheres
98.5
1983
Male, age 76, both hemispheres
92.5
Nucleus raphe magnus nTPM: 112.3
2160
Male, age 61, both hemispheres
158.8
2328
Male, age 80, both hemispheres
119.8
2172
Female, age 85, both hemispheres
113.3
2459
Female, age 91, both hemispheres
101.4
2455
Male, age 74, both hemispheres
90.3
2051
Male, age 76, both hemispheres
90.2
Paramedian reticular nucleus nTPM: 93.8
2313
Male, age 61, both hemispheres
107.5
2050
Female, age 85, both hemispheres
99.1
2052
Male, age 76, both hemispheres
86.5
2057
Male, age 80, both hemispheres
82.1
Pedunculopontine tegmental nucleus nTPM: 98.1
2338
Male, age 61, both hemispheres
105.3
1921
Female, age 85, both hemispheres
98.4
2334
Male, age 80, both hemispheres
90.7
Pontine nuclei nTPM: 103.9
2727
Male, age 61, right hemisphere
128.2
2787
Female, age 85, both hemispheres
110.9
2454
Male, age 74, left hemisphere
110.2
2115
Male, age 80, left hemisphere
107.8
2319
Female, age 91, both hemispheres
100.7
1968
Male, age 76, left hemisphere
96.8
1863
Male, age 55, unknown
90.7
2109
Female, age 72, unknown
85.9
Pontine raphe nucleus nTPM: 100.8
2122
Female, age 85, midline
105.5
2853
Male, age 76, midline
96.2
Posteroventral cochlear nucleus nTPM: 82.6
2752
Female, age 85, both hemispheres
95.5
2135
Female, age 91, both hemispheres
85.1
2341
Male, age 80, both hemispheres
79.6
2371
Male, age 61, both hemispheres
76.9
2070
Male, age 76, both hemispheres
75.7
Principal sensory trigeminal nucleus nTPM: 110.6
2158
Male, age 61, both hemispheres
140.9
2008
Male, age 80, left hemisphere
129.2
2367
Female, age 91, left hemisphere
93.8
2324
Male, age 76, both hemispheres
78.7
Reticular pontine nucleus, caudal nTPM: 100.9
2332
Male, age 80, right hemisphere
122.7
2559
Male, age 74, both hemispheres
110.2
2092
Male, age 76, both hemispheres
87.0
2457
Female, age 91, both hemispheres
83.8
Reticular pontine nucleus, oral nTPM: 111.5
2361
Male, age 74, both hemispheres
178.3
2012
Female, age 85, both hemispheres
105.5
2366
Female, age 91, both hemispheres
103.7
2167
Male, age 76, both hemispheres
89.7
1939
Male, age 80, both hemispheres
80.1
Reticulotegmental nucleus nTPM: 97.8
2325
Male, age 76, both hemispheres
109.0
2452
Male, age 74, both hemispheres
102.1
2333
Male, age 80, both hemispheres
91.9
2322
Female, age 91, both hemispheres
88.2
Spinal trigeminal nucleus, oral nTPM: 80.9
2164
Male, age 80, both hemispheres
83.5
2737
Female, age 85, both hemispheres
80.7
1978
Male, age 76, both hemispheres
78.3
Subcoeruleus area nTPM: 98.1
2089
Male, age 76, left hemisphere
107.8
1958
Male, age 80, both hemispheres
104.7
2369
Female, age 85, left hemisphere
99.6
2451
Male, age 74, both hemispheres
91.3
2323
Female, age 91, left hemisphere
86.9
Superior olive nTPM: 107.3
2329
Male, age 80, right hemisphere
121.8
1875
Female, age 85, both hemispheres
119.5
2561
Female, age 91, both hemispheres
112.8
2020
Male, age 76, both hemispheres
94.1
2364
Male, age 74, right hemisphere
88.4
Ventral periolivary nuclei nTPM: 104.9
2130
Female, age 85, both hemispheres
124.1
2165
Male, age 80, both hemispheres
109.1
2794
Female, age 91, left hemisphere
105.5
2023
Male, age 76, both hemispheres
80.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 95.2
1959
Male, age 76, both hemispheres
108.0
2161
Male, age 80, both hemispheres
97.0
2840
Female, age 85, both hemispheres
95.8
2449
Male, age 74, both hemispheres
94.7
2359
Male, age 61, both hemispheres
89.1
2456
Female, age 91, both hemispheres
86.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
