HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.8 nTPM
HPA Brain:19.8 nTPM
GTEx:20.8 nTPM
FANTOM5:25.5 Scaled Tags Per Million
Pig:41.0 nTPM
Mouse:33.3 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074936
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.8
Sample id Sample description nTPM
Hippocampus
nTPM: 18.4
1898 Male, age 80, left hemisphere 22.5
1911 Female, age 85, right hemisphere 18.7
2529 Female, age 94, left hemisphere 18.6
1855 Male, age 76, left hemisphere 17.9
2148 Female, age 91, left hemisphere 16.4
2621 Female, age 67, right hemisphere 16.4
Dentate gyrus
nTPM: 17.2
2530 Female, age 94, left hemisphere 19.6
2010 Male, age 76, both hemispheres 18.9
2528 Male, age 74, both hemispheres 18.0
2246 Female, age 85, both hemispheres 17.4
1927 Female, age 91, both hemispheres 16.5
2531 Female, age 67, both hemispheres 12.5
Entorhinal gyrus
nTPM: 18.2
2117 Female, age 91, right hemisphere 22.6
2764 Male, age 80, right hemisphere 20.3
2686 Male, age 75, right hemisphere 19.5
1938 Female, age 85, left hemisphere 17.1
1787 Male, age 76, left hemisphere 15.7
2613 Female, age 94, left hemisphere 14.0
Hippocampus, CA1
nTPM: 18.5
2749 Male, age 80, left hemisphere 21.6
1873 Female, age 85, both hemispheres 20.0
2527 Male, age 74, both hemispheres 19.1
2082 Female, age 91, right hemisphere 18.1
2045 Male, age 76, both hemispheres 13.5
Hippocampus, CA2
nTPM: 19.8
1963 Male, age 80, left hemisphere 25.6
2249 Male, age 74, both hemispheres 21.2
1892 Male, age 76, both hemispheres 20.4
1940 Female, age 85, left hemisphere 18.4
2113 Female, age 91, right hemisphere 16.9
2437 Female, age 94, left hemisphere 16.4
Hippocampus, CA3
nTPM: 17.9
2436 Male, age 74, both hemispheres 20.8
1891 Female, age 85, both hemispheres 18.9
2137 Male, age 80, left hemisphere 18.9
1867 Male, age 76, both hemispheres 17.6
2620 Female, age 94, left hemisphere 15.7
2861 Female, age 67, both hemispheres 15.4
Parahippocampal cortex
nTPM: 16.7
1850 Male, age 80, both hemispheres 21.5
1990 Female, age 91, right hemisphere 18.6
2692 Male, age 74, both hemispheres 18.6
2245 Female, age 91, both hemispheres 17.7
2250 Female, age 67, right hemisphere 17.0
1933 Female, age 85, both hemispheres 16.4
2018 Male, age 76, both hemispheres 15.3
2693 Female, age 94, both hemispheres 14.8
2532 Female, age 72, left hemisphere 14.1
2622 Female, age 67, right hemisphere 13.3
Perirhinal gyrus
nTPM: 18.8
1794 Male, age 80, right hemisphere 23.0
1841 Female, age 85, right hemisphere 18.9
1847 Female, age 91, left hemisphere 18.2
2521 Female, age 94, right hemisphere 16.9
2848 Male, age 76, right hemisphere 16.9
Subiculum
nTPM: 19.2
1901 Male, age 80, both hemispheres 22.8
2042 Male, age 76, both hemispheres 20.8
1977 Female, age 85, both hemispheres 19.8
2619 Male, age 74, both hemispheres 18.8
2729 Female, age 91, right hemisphere 18.0
2438 Female, age 94, left hemisphere 15.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 32.4
Min nTPM: 11.2
Std nTPM: 3.6
Median nTPM: 20.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 32.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 31.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 30.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 30.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 30.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 28.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 28.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 27.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 27.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 27.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.5
FF:10153-102I9 76 years, female 34.4
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.0
Pig sample Sample description nTPM
Subiculum
nTPM: 38.9
Samples: 4

Max nTPM: 45.7
Min nTPM: 33.6
Sample A Female 45.7
Sample B Female 38.2
Sample C Male 38.1
Sample D Male 33.6
Dorsal hippocampus
nTPM: 37.1
Samples: 4

Max nTPM: 42.3
Min nTPM: 27.7
Sample A Female 42.3
Sample B Female 38.4
Sample C Male 39.9
Sample D Male 27.7
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 42.0
Min nTPM: 30.9
Sample A Female 33.5
Sample B Female 38.9
Sample C Male 42.0
Sample D Male 30.9
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 54.7
Min nTPM: 33.0
Sample A Female 40.9
Sample B Female 33.0
Sample C Male 54.7
Sample D Male 35.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.3
Samples: 4

Max nTPM: 35.3
Min nTPM: 32.0
Sample A Male 32.0
Sample B Male 33.7
Sample C Female 32.0
Sample D Female 35.3
Hippocampal formation
nTPM: 32.8
Samples: 4

Max nTPM: 36.2
Min nTPM: 29.3
Sample A Male 36.2
Sample B Male 29.3
Sample C Female 31.6
Sample D Female 34.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
513226 Antisense, RP_040810_01_C02, Mouse strain C57BL/6J (56 days, male) 1.2

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