HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:26.8 nTPM
HPA Brain:36.8 nTPM
GTEx:26.8 nTPM
FANTOM5:34.3 Scaled Tags Per Million
Pig:34.5 nTPM
Mouse:64.6 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049918Antibody CAB075757
Glial cells Not detectedMedium
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.4
1898 Male, age 80, left hemisphere 42.6
1855 Male, age 76, left hemisphere 40.1
2621 Female, age 67, right hemisphere 39.1
2148 Female, age 91, left hemisphere 34.0
2529 Female, age 94, left hemisphere 33.0
1911 Female, age 85, right hemisphere 29.3
Dentate gyrus
nTPM: 34.9
2531 Female, age 67, both hemispheres 37.9
1927 Female, age 91, both hemispheres 37.3
2010 Male, age 76, both hemispheres 35.3
2246 Female, age 85, both hemispheres 35.2
2530 Female, age 94, left hemisphere 33.5
2528 Male, age 74, both hemispheres 29.9
Entorhinal gyrus
nTPM: 31.0
1938 Female, age 85, left hemisphere 35.9
2764 Male, age 80, right hemisphere 34.8
1787 Male, age 76, left hemisphere 30.5
2117 Female, age 91, right hemisphere 29.0
2613 Female, age 94, left hemisphere 28.9
2686 Male, age 75, right hemisphere 27.1
Hippocampus, CA1
nTPM: 36.8
2749 Male, age 80, left hemisphere 42.3
1873 Female, age 85, both hemispheres 41.2
2527 Male, age 74, both hemispheres 38.8
2045 Male, age 76, both hemispheres 34.5
2082 Female, age 91, right hemisphere 27.3
Hippocampus, CA2
nTPM: 34.7
1892 Male, age 76, both hemispheres 47.8
1963 Male, age 80, left hemisphere 39.0
2249 Male, age 74, both hemispheres 33.3
1940 Female, age 85, left hemisphere 30.9
2437 Female, age 94, left hemisphere 29.2
2113 Female, age 91, right hemisphere 27.7
Hippocampus, CA3
nTPM: 35.1
1867 Male, age 76, both hemispheres 37.1
2137 Male, age 80, left hemisphere 36.6
1891 Female, age 85, both hemispheres 36.1
2436 Male, age 74, both hemispheres 34.3
2620 Female, age 94, left hemisphere 34.2
2861 Female, age 67, both hemispheres 32.1
Parahippocampal cortex
nTPM: 32.8
2245 Female, age 91, both hemispheres 39.9
2532 Female, age 72, left hemisphere 36.7
1850 Male, age 80, both hemispheres 35.9
1933 Female, age 85, both hemispheres 34.6
2250 Female, age 67, right hemisphere 34.6
2622 Female, age 67, right hemisphere 32.0
1990 Female, age 91, right hemisphere 30.8
2018 Male, age 76, both hemispheres 30.7
2692 Male, age 74, both hemispheres 28.7
2693 Female, age 94, both hemispheres 24.2
Perirhinal gyrus
nTPM: 34.8
1841 Female, age 85, right hemisphere 37.9
1847 Female, age 91, left hemisphere 37.9
1794 Male, age 80, right hemisphere 35.6
2848 Male, age 76, right hemisphere 31.8
2521 Female, age 94, right hemisphere 30.9
Subiculum
nTPM: 32.3
1977 Female, age 85, both hemispheres 36.1
1901 Male, age 80, both hemispheres 34.3
2042 Male, age 76, both hemispheres 33.1
2438 Female, age 94, left hemisphere 33.1
2619 Male, age 74, both hemispheres 30.0
2729 Female, age 91, right hemisphere 27.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.8
Samples: 197

Max nTPM: 72.6
Min nTPM: 14.1
Std nTPM: 7.3
Median nTPM: 25.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 72.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 49.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 44.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 41.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 40.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 40.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 40.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 38.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 38.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.3
FF:10169-103B7 60 years, female 36.3
FF:10153-102I9 76 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.5
Pig sample Sample description nTPM
Subiculum
nTPM: 28.9
Samples: 4

Max nTPM: 33.1
Min nTPM: 26.0
Sample A Female 33.1
Sample B Female 27.7
Sample C Male 28.9
Sample D Male 26.0
Dorsal hippocampus
nTPM: 34.5
Samples: 4

Max nTPM: 37.6
Min nTPM: 31.0
Sample A Female 37.6
Sample B Female 35.4
Sample C Male 33.9
Sample D Male 31.0
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 31.2
Min nTPM: 26.5
Sample A Female 30.5
Sample B Female 31.2
Sample C Male 27.5
Sample D Male 26.5
Ventral hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 33.8
Min nTPM: 27.5
Sample A Female 33.8
Sample B Female 27.5
Sample C Male 32.6
Sample D Male 33.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.5
Samples: 4

Max nTPM: 62.8
Min nTPM: 52.8
Sample A Male 55.0
Sample B Male 59.3
Sample C Female 62.8
Sample D Female 52.8
Hippocampal formation
nTPM: 64.6
Samples: 4

Max nTPM: 74.3
Min nTPM: 56.5
Sample A Male 74.3
Sample B Male 65.7
Sample C Female 56.5
Sample D Female 61.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
68193039 Antisense, RP_040825_02_A04, Mouse strain C57BL/6J (56 days, male) 10.6

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