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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
54.1
nTPM
HPA Brain:
36.2
nTPM
GTEx:
54.1
nTPM
FANTOM5:
34.4
Scaled Tags Per Million
Pig:
24.3
nTPM
Mouse:
23.9
nTPM
Allen mouse:
1.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
36.2
Sample id
Sample description
nTPM
Amygdala nTPM: 36.2
2514
Male, age 75, right hemisphere
40.7
2814
Male, age 76, right hemisphere
40.6
1987
Female, age 91, left hemisphere
37.8
2695
Female, age 67, right hemisphere
32.3
2517
Female, age 94, left hemisphere
29.4
Basal amygdala nTPM: 26.9
2609
Male, age 75, right hemisphere
33.2
2110
Male, age 80, left hemisphere
29.8
1955
Male, age 76, both hemispheres
28.7
2685
Female, age 94, left hemisphere
26.9
2243
Female, age 91, right hemisphere
24.4
2827
Female, age 67, right hemisphere
18.5
Central amygdala nTPM: 31.7
1905
Male, age 76, both hemispheres
38.3
2701
Female, age 91, right hemisphere
32.1
2515
Male, age 75, right hemisphere
32.0
2239
Male, age 80, left hemisphere
30.7
2826
Female, age 94, left hemisphere
25.5
Corticomedial amygdala nTPM: 28.6
2829
Male, age 80, left hemisphere
33.8
2428
Male, age 75, right hemisphere
33.5
2429
Female, age 94, left hemisphere
30.2
2240
Male, age 76, both hemispheres
29.2
2242
Female, age 91, right hemisphere
28.2
2535
Female, age 67, right hemisphere
16.5
Lateral amygdala nTPM: 29.9
1883
Male, age 76, both hemispheres
40.3
2516
Male, age 75, right hemisphere
37.0
2534
Female, age 94, left hemisphere
27.5
2256
Male, age 80, left hemisphere
25.9
2255
Female, age 91, right hemisphere
25.2
2830
Female, age 67, right hemisphere
23.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
54.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 54.1
Samples: 152
Max nTPM: 103.1
Min nTPM: 34.9
Std nTPM: 10.9
Median nTPM: 52.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
103.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
89.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
88.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
85.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
84.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
82.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
81.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
80.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
79.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
75.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
73.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
71.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
71.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
66.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
66.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
65.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
65.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
64.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
62.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
62.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
62.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
62.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
61.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
60.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
60.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
60.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
60.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
60.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
59.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
59.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
59.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
59.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
59.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
59.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
58.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
58.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
58.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
58.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
57.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
56.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
56.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
56.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
56.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
56.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
56.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
56.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
56.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
55.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
55.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
55.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
55.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
55.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
55.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
55.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
55.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
55.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
55.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
54.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
54.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
54.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
54.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
54.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
54.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
54.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
54.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
53.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
53.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
53.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
53.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
53.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
53.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
53.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
53.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
52.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
52.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
52.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
52.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
52.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
52.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
52.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
52.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
52.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
52.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
51.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
51.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
51.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
51.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
51.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
51.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
51.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
51.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
50.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
50.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
50.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
50.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
50.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
50.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
50.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
49.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
49.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
49.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
49.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
49.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
49.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
49.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
48.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
48.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
48.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
48.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
48.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
48.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
48.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
48.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
47.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
47.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
47.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
47.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
46.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
46.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
46.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
45.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
45.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
45.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
45.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
44.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
44.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
44.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
44.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
44.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
44.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
44.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
43.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
43.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
43.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
43.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
43.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
43.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
42.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
42.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
42.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
42.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
40.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
39.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
39.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
39.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
39.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
38.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
38.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
38.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
34.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
23.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 24.0
Samples: 4
Max nTPM: 26.4
Min nTPM: 22.7
Sample A
Male
23.6
Sample B
Male
26.4
Sample C
Female
22.7
Sample D
Female
23.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.