HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:33.4 nTPM
HPA Brain:108.7 nTPM
GTEx:33.4 nTPM
FANTOM5:261.0 Scaled Tags Per Million
Pig:144.2 nTPM
Mouse:682.6 nTPM
Allen mouse:20.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045385Antibody HPA073644Antibody HPA073656Antibody CAB010065
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 108.7
Sample id Sample description nTPM
Hippocampus
nTPM: 86.0
1898 Male, age 80, left hemisphere 127.1
2529 Female, age 94, left hemisphere 91.6
2621 Female, age 67, right hemisphere 76.8
1855 Male, age 76, left hemisphere 74.9
2148 Female, age 91, left hemisphere 74.2
1911 Female, age 85, right hemisphere 71.2
Dentate gyrus
nTPM: 90.3
2010 Male, age 76, both hemispheres 115.0
1927 Female, age 91, both hemispheres 104.3
2528 Male, age 74, both hemispheres 88.8
2530 Female, age 94, left hemisphere 86.4
2246 Female, age 85, both hemispheres 80.0
2531 Female, age 67, both hemispheres 67.4
Entorhinal gyrus
nTPM: 81.1
2764 Male, age 80, right hemisphere 101.7
1938 Female, age 85, left hemisphere 97.4
1787 Male, age 76, left hemisphere 83.6
2117 Female, age 91, right hemisphere 74.6
2686 Male, age 75, right hemisphere 65.8
2613 Female, age 94, left hemisphere 63.8
Hippocampus, CA1
nTPM: 101.2
2749 Male, age 80, left hemisphere 147.4
2527 Male, age 74, both hemispheres 103.8
1873 Female, age 85, both hemispheres 90.2
2045 Male, age 76, both hemispheres 87.4
2082 Female, age 91, right hemisphere 77.2
Hippocampus, CA2
nTPM: 100.5
2249 Male, age 74, both hemispheres 124.5
1892 Male, age 76, both hemispheres 123.5
1963 Male, age 80, left hemisphere 110.2
1940 Female, age 85, left hemisphere 83.5
2437 Female, age 94, left hemisphere 83.0
2113 Female, age 91, right hemisphere 78.0
Hippocampus, CA3
nTPM: 93.9
2436 Male, age 74, both hemispheres 127.0
1867 Male, age 76, both hemispheres 112.3
2137 Male, age 80, left hemisphere 110.5
1891 Female, age 85, both hemispheres 80.5
2620 Female, age 94, left hemisphere 68.5
2861 Female, age 67, both hemispheres 64.3
Parahippocampal cortex
nTPM: 88.8
1850 Male, age 80, both hemispheres 120.7
2250 Female, age 67, right hemisphere 104.0
1990 Female, age 91, right hemisphere 102.6
2018 Male, age 76, both hemispheres 99.3
1933 Female, age 85, both hemispheres 90.7
2245 Female, age 91, both hemispheres 83.4
2532 Female, age 72, left hemisphere 80.7
2693 Female, age 94, both hemispheres 76.3
2692 Male, age 74, both hemispheres 70.3
2622 Female, age 67, right hemisphere 60.2
Perirhinal gyrus
nTPM: 108.7
1794 Male, age 80, right hemisphere 125.9
1841 Female, age 85, right hemisphere 122.2
1847 Female, age 91, left hemisphere 118.3
2521 Female, age 94, right hemisphere 94.1
2848 Male, age 76, right hemisphere 83.1
Subiculum
nTPM: 81.5
1977 Female, age 85, both hemispheres 102.1
1901 Male, age 80, both hemispheres 92.2
2619 Male, age 74, both hemispheres 76.2
2042 Male, age 76, both hemispheres 74.8
2438 Female, age 94, left hemisphere 73.9
2729 Female, age 91, right hemisphere 70.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.4
Samples: 197

Max nTPM: 77.3
Min nTPM: 14.5
Std nTPM: 11.9
Median nTPM: 30.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 77.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 70.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 70.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 69.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 63.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 60.3
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 59.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 59.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 59.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 57.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 56.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 261.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 261.0
FF:10169-103B7 60 years, female 316.7
FF:10153-102I9 76 years, female 205.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.2
Pig sample Sample description nTPM
Subiculum
nTPM: 113.7
Samples: 4

Max nTPM: 145.2
Min nTPM: 95.8
Sample A Female 145.2
Sample B Female 110.4
Sample C Male 95.8
Sample D Male 103.4
Dorsal hippocampus
nTPM: 144.2
Samples: 4

Max nTPM: 184.6
Min nTPM: 113.3
Sample A Female 184.6
Sample B Female 142.2
Sample C Male 136.5
Sample D Male 113.3
Entorhinal cortex
nTPM: 125.9
Samples: 4

Max nTPM: 159.7
Min nTPM: 102.8
Sample A Female 128.9
Sample B Female 159.7
Sample C Male 112.2
Sample D Male 102.8
Ventral hippocampus
nTPM: 124.0
Samples: 4

Max nTPM: 141.1
Min nTPM: 90.2
Sample A Female 141.1
Sample B Female 90.2
Sample C Male 132.0
Sample D Male 132.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 682.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 635.4
Samples: 4

Max nTPM: 667.3
Min nTPM: 594.6
Sample A Male 594.6
Sample B Male 639.0
Sample C Female 667.3
Sample D Female 640.6
Hippocampal formation
nTPM: 682.7
Samples: 4

Max nTPM: 758.7
Min nTPM: 610.0
Sample A Male 758.7
Sample B Male 610.0
Sample C Female 683.4
Sample D Female 678.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.8
69783047 Antisense, RP_050505_04_C05, Mouse strain C57BL/6J (56 days, male) 20.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org