HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:8.8 nTPM
HPA Brain:13.1 nTPM
GTEx:8.8 nTPM
FANTOM5:38.8 Scaled Tags Per Million
Pig:28.8 nTPM
Mouse:18.9 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039083Antibody HPA046344
Glial cells LowNot detected
Neuronal cells MediumNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.1
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
1898 Male, age 80, left hemisphere 14.8
2529 Female, age 94, left hemisphere 13.4
2148 Female, age 91, left hemisphere 12.5
1911 Female, age 85, right hemisphere 12.4
1855 Male, age 76, left hemisphere 12.2
2621 Female, age 67, right hemisphere 11.4
Dentate gyrus
nTPM: 12.1
2010 Male, age 76, both hemispheres 13.7
1927 Female, age 91, both hemispheres 13.3
2528 Male, age 74, both hemispheres 12.9
2530 Female, age 94, left hemisphere 11.3
2246 Female, age 85, both hemispheres 11.1
2531 Female, age 67, both hemispheres 10.4
Entorhinal gyrus
nTPM: 11.9
1938 Female, age 85, left hemisphere 13.5
2117 Female, age 91, right hemisphere 12.9
1787 Male, age 76, left hemisphere 11.9
2686 Male, age 75, right hemisphere 11.6
2764 Male, age 80, right hemisphere 11.5
2613 Female, age 94, left hemisphere 10.2
Hippocampus, CA1
nTPM: 12.5
1873 Female, age 85, both hemispheres 13.1
2527 Male, age 74, both hemispheres 12.6
2082 Female, age 91, right hemisphere 12.5
2045 Male, age 76, both hemispheres 12.4
2749 Male, age 80, left hemisphere 11.6
Hippocampus, CA2
nTPM: 13.1
1963 Male, age 80, left hemisphere 14.5
2249 Male, age 74, both hemispheres 14.4
1892 Male, age 76, both hemispheres 13.6
2113 Female, age 91, right hemisphere 12.7
1940 Female, age 85, left hemisphere 12.0
2437 Female, age 94, left hemisphere 11.2
Hippocampus, CA3
nTPM: 12.3
2436 Male, age 74, both hemispheres 15.3
1891 Female, age 85, both hemispheres 13.7
1867 Male, age 76, both hemispheres 13.3
2620 Female, age 94, left hemisphere 11.2
2137 Male, age 80, left hemisphere 11.0
2861 Female, age 67, both hemispheres 9.2
Parahippocampal cortex
nTPM: 12.3
2250 Female, age 67, right hemisphere 14.4
1850 Male, age 80, both hemispheres 14.1
2693 Female, age 94, both hemispheres 13.6
2018 Male, age 76, both hemispheres 13.3
1933 Female, age 85, both hemispheres 13.1
1990 Female, age 91, right hemisphere 12.9
2245 Female, age 91, both hemispheres 12.1
2532 Female, age 72, left hemisphere 11.1
2622 Female, age 67, right hemisphere 9.4
2692 Male, age 74, both hemispheres 9.1
Perirhinal gyrus
nTPM: 12.3
1841 Female, age 85, right hemisphere 13.8
1847 Female, age 91, left hemisphere 13.5
1794 Male, age 80, right hemisphere 12.7
2521 Female, age 94, right hemisphere 11.1
2848 Male, age 76, right hemisphere 10.5
Subiculum
nTPM: 12.8
1977 Female, age 85, both hemispheres 13.5
1901 Male, age 80, both hemispheres 13.4
2438 Female, age 94, left hemisphere 12.8
2042 Male, age 76, both hemispheres 12.6
2729 Female, age 91, right hemisphere 12.5
2619 Male, age 74, both hemispheres 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 18.9
Min nTPM: 4.7
Std nTPM: 1.8
Median nTPM: 8.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 18.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 13.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 13.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 13.3
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 13.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 12.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 12.4
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 12.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 12.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.8
FF:10153-102I9 76 years, female 41.2
FF:10169-103B7 60 years, female 36.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.8
Pig sample Sample description nTPM
Subiculum
nTPM: 27.4
Samples: 4

Max nTPM: 34.4
Min nTPM: 23.9
Sample A Female 34.4
Sample B Female 26.1
Sample C Male 23.9
Sample D Male 25.0
Dorsal hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 34.7
Min nTPM: 25.5
Sample A Female 34.7
Sample B Female 26.4
Sample C Male 28.5
Sample D Male 25.5
Entorhinal cortex
nTPM: 26.5
Samples: 4

Max nTPM: 29.6
Min nTPM: 23.1
Sample A Female 29.0
Sample B Female 29.6
Sample C Male 23.1
Sample D Male 24.3
Ventral hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 30.7
Min nTPM: 21.0
Sample A Female 30.7
Sample B Female 21.0
Sample C Male 26.8
Sample D Male 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 20.5
Min nTPM: 14.8
Sample A Male 17.8
Sample B Male 18.7
Sample C Female 20.5
Sample D Female 14.8
Hippocampal formation
nTPM: 19.0
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.3
Sample A Male 21.2
Sample B Male 16.3
Sample C Female 19.6
Sample D Female 18.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
68341639 Antisense, RP_041207_01_H08, Mouse strain C57BL/6J (56 days, male) 4.6

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