HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:36.5 nTPM
HPA Brain:104.2 nTPM
GTEx:36.5 nTPM
FANTOM5:60.5 Scaled Tags Per Million
Pig:49.5 nTPM
Mouse:132.2 nTPM
Allen mouse:11.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007653
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 104.2
Sample id Sample description nTPM
Hippocampus
nTPM: 95.6
2621 Female, age 67, right hemisphere 106.3
2148 Female, age 91, left hemisphere 98.1
1898 Male, age 80, left hemisphere 96.8
1855 Male, age 76, left hemisphere 94.8
1911 Female, age 85, right hemisphere 90.3
2529 Female, age 94, left hemisphere 87.2
Dentate gyrus
nTPM: 96.1
2530 Female, age 94, left hemisphere 108.5
2531 Female, age 67, both hemispheres 107.4
1927 Female, age 91, both hemispheres 97.4
2010 Male, age 76, both hemispheres 94.4
2246 Female, age 85, both hemispheres 88.1
2528 Male, age 74, both hemispheres 80.7
Entorhinal gyrus
nTPM: 87.8
2613 Female, age 94, left hemisphere 104.2
2764 Male, age 80, right hemisphere 92.9
1787 Male, age 76, left hemisphere 87.8
1938 Female, age 85, left hemisphere 84.6
2686 Male, age 75, right hemisphere 80.0
2117 Female, age 91, right hemisphere 77.4
Hippocampus, CA1
nTPM: 99.8
2749 Male, age 80, left hemisphere 144.3
2045 Male, age 76, both hemispheres 95.7
1873 Female, age 85, both hemispheres 90.7
2082 Female, age 91, right hemisphere 87.5
2527 Male, age 74, both hemispheres 81.0
Hippocampus, CA2
nTPM: 88.9
1963 Male, age 80, left hemisphere 105.8
1892 Male, age 76, both hemispheres 92.6
2437 Female, age 94, left hemisphere 90.7
2113 Female, age 91, right hemisphere 83.4
1940 Female, age 85, left hemisphere 82.6
2249 Male, age 74, both hemispheres 78.0
Hippocampus, CA3
nTPM: 104.2
2137 Male, age 80, left hemisphere 133.8
2620 Female, age 94, left hemisphere 132.2
2861 Female, age 67, both hemispheres 117.7
1867 Male, age 76, both hemispheres 85.5
2436 Male, age 74, both hemispheres 78.3
1891 Female, age 85, both hemispheres 78.0
Parahippocampal cortex
nTPM: 86.9
2245 Female, age 91, both hemispheres 101.8
2622 Female, age 67, right hemisphere 92.6
2532 Female, age 72, left hemisphere 89.3
2018 Male, age 76, both hemispheres 86.5
2693 Female, age 94, both hemispheres 85.3
2250 Female, age 67, right hemisphere 85.1
1850 Male, age 80, both hemispheres 85.0
2692 Male, age 74, both hemispheres 81.9
1933 Female, age 85, both hemispheres 81.6
1990 Female, age 91, right hemisphere 79.7
Perirhinal gyrus
nTPM: 88.6
1794 Male, age 80, right hemisphere 103.4
2521 Female, age 94, right hemisphere 90.2
1847 Female, age 91, left hemisphere 88.1
1841 Female, age 85, right hemisphere 81.2
2848 Male, age 76, right hemisphere 79.9
Subiculum
nTPM: 85.0
1901 Male, age 80, both hemispheres 96.2
2042 Male, age 76, both hemispheres 92.5
2729 Female, age 91, right hemisphere 83.6
1977 Female, age 85, both hemispheres 79.5
2438 Female, age 94, left hemisphere 79.0
2619 Male, age 74, both hemispheres 79.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.5
Samples: 197

Max nTPM: 64.5
Min nTPM: 17.8
Std nTPM: 9.2
Median nTPM: 36.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 64.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 60.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 57.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 55.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 55.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 54.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 53.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 53.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 50.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 50.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.5
FF:10153-102I9 76 years, female 64.0
FF:10169-103B7 60 years, female 57.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.5
Pig sample Sample description nTPM
Subiculum
nTPM: 47.2
Samples: 4

Max nTPM: 59.5
Min nTPM: 39.6
Sample A Female 59.5
Sample B Female 43.1
Sample C Male 46.4
Sample D Male 39.6
Dorsal hippocampus
nTPM: 46.0
Samples: 4

Max nTPM: 54.6
Min nTPM: 37.2
Sample A Female 54.6
Sample B Female 47.8
Sample C Male 44.4
Sample D Male 37.2
Entorhinal cortex
nTPM: 49.5
Samples: 4

Max nTPM: 54.7
Min nTPM: 43.8
Sample A Female 54.7
Sample B Female 43.8
Sample C Male 52.5
Sample D Male 46.8
Ventral hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 57.9
Min nTPM: 36.3
Sample A Female 42.6
Sample B Female 36.3
Sample C Male 57.9
Sample D Male 49.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.2
Samples: 4

Max nTPM: 134.1
Min nTPM: 127.7
Sample A Male 134.1
Sample B Male 133.6
Sample C Female 127.7
Sample D Female 133.4
Hippocampal formation
nTPM: 128.0
Samples: 4

Max nTPM: 130.7
Min nTPM: 122.8
Sample A Male 122.8
Sample B Male 129.3
Sample C Female 130.7
Sample D Female 129.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.2
74427051 Antisense, RP_051206_02_H06, Mouse strain C57BL/6J (56 days, male) 11.2

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