HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:266.5 nTPM
HPA Brain:223.1 nTPM
GTEx:266.5 nTPM
FANTOM5:64.4 Scaled Tags Per Million
Pig:1.4 nTPM
Mouse:72.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051164
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 223.1
Sample id Sample description nTPM
Hippocampus
nTPM: 223.1
2529 Female, age 94, left hemisphere 273.4
1898 Male, age 80, left hemisphere 253.9
2148 Female, age 91, left hemisphere 252.4
1911 Female, age 85, right hemisphere 224.2
2621 Female, age 67, right hemisphere 195.2
1855 Male, age 76, left hemisphere 139.7
Dentate gyrus
nTPM: 188.9
2528 Male, age 74, both hemispheres 264.7
2530 Female, age 94, left hemisphere 210.8
2531 Female, age 67, both hemispheres 194.1
1927 Female, age 91, both hemispheres 162.1
2010 Male, age 76, both hemispheres 154.4
2246 Female, age 85, both hemispheres 147.5
Entorhinal gyrus
nTPM: 195.2
2117 Female, age 91, right hemisphere 319.4
2686 Male, age 75, right hemisphere 218.1
2764 Male, age 80, right hemisphere 200.7
1938 Female, age 85, left hemisphere 167.4
2613 Female, age 94, left hemisphere 136.2
1787 Male, age 76, left hemisphere 129.6
Hippocampus, CA1
nTPM: 146.9
2527 Male, age 74, both hemispheres 200.8
1873 Female, age 85, both hemispheres 183.9
2749 Male, age 80, left hemisphere 131.1
2082 Female, age 91, right hemisphere 120.8
2045 Male, age 76, both hemispheres 97.9
Hippocampus, CA2
nTPM: 179.7
1963 Male, age 80, left hemisphere 278.7
2249 Male, age 74, both hemispheres 209.3
2437 Female, age 94, left hemisphere 188.3
2113 Female, age 91, right hemisphere 155.8
1940 Female, age 85, left hemisphere 150.6
1892 Male, age 76, both hemispheres 95.2
Hippocampus, CA3
nTPM: 176.9
2861 Female, age 67, both hemispheres 295.4
2620 Female, age 94, left hemisphere 176.1
1891 Female, age 85, both hemispheres 166.4
2436 Male, age 74, both hemispheres 165.6
1867 Male, age 76, both hemispheres 143.6
2137 Male, age 80, left hemisphere 114.3
Parahippocampal cortex
nTPM: 144.8
2622 Female, age 67, right hemisphere 183.8
2692 Male, age 74, both hemispheres 178.0
1990 Female, age 91, right hemisphere 171.2
1933 Female, age 85, both hemispheres 166.6
2245 Female, age 91, both hemispheres 150.0
2250 Female, age 67, right hemisphere 135.9
2018 Male, age 76, both hemispheres 126.9
2532 Female, age 72, left hemisphere 124.2
1850 Male, age 80, both hemispheres 113.4
2693 Female, age 94, both hemispheres 97.5
Perirhinal gyrus
nTPM: 116.5
1794 Male, age 80, right hemisphere 157.4
2521 Female, age 94, right hemisphere 121.6
1847 Female, age 91, left hemisphere 118.0
1841 Female, age 85, right hemisphere 108.0
2848 Male, age 76, right hemisphere 77.4
Subiculum
nTPM: 183.4
2729 Female, age 91, right hemisphere 279.4
2619 Male, age 74, both hemispheres 214.4
1977 Female, age 85, both hemispheres 173.9
2042 Male, age 76, both hemispheres 164.2
1901 Male, age 80, both hemispheres 161.1
2438 Female, age 94, left hemisphere 107.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 266.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 266.5
Samples: 197

Max nTPM: 648.4
Min nTPM: 54.8
Std nTPM: 112.0
Median nTPM: 253.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 648.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 620.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 599.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 576.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 567.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 552.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 510.5
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 510.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 505.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 504.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 503.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.4
FF:10153-102I9 76 years, female 81.1
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.4
Pig sample Sample description nTPM
Subiculum
nTPM: 1.4
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.1
Sample A Female 1.9
Sample B Female 1.3
Sample C Male 1.1
Sample D Male 1.2
Dorsal hippocampus
nTPM: 0.5
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.4
Sample A Female 0.4
Sample B Female 0.6
Sample C Male 0.6
Sample D Male 0.5
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.7
Sample A Female 0.7
Sample B Female 0.8
Sample C Male 0.9
Sample D Male 1.1
Ventral hippocampus
nTPM: 0.8
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.5
Sample A Female 0.5
Sample B Female 0.8
Sample C Male 1.0
Sample D Male 0.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 72.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 68.4
Min nTPM: 48.6
Sample A Male 68.4
Sample B Male 58.6
Sample C Female 65.2
Sample D Female 48.6
Hippocampal formation
nTPM: 72.7
Samples: 4

Max nTPM: 83.5
Min nTPM: 63.3
Sample A Male 63.3
Sample B Male 70.6
Sample C Female 73.5
Sample D Female 83.5

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