HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:20.9 nTPM
HPA Brain:57.8 nTPM
GTEx:20.9 nTPM
FANTOM5:80.5 Scaled Tags Per Million
Pig:67.2 nTPM
Mouse:63.6 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052488
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.8
Sample id Sample description nTPM
Hippocampus
nTPM: 55.6
2621 Female, age 67, right hemisphere 57.2
1898 Male, age 80, left hemisphere 57.1
2148 Female, age 91, left hemisphere 56.2
1855 Male, age 76, left hemisphere 55.9
1911 Female, age 85, right hemisphere 53.5
2529 Female, age 94, left hemisphere 53.5
Dentate gyrus
nTPM: 52.0
2010 Male, age 76, both hemispheres 56.8
2246 Female, age 85, both hemispheres 55.9
1927 Female, age 91, both hemispheres 55.8
2528 Male, age 74, both hemispheres 49.1
2531 Female, age 67, both hemispheres 48.5
2530 Female, age 94, left hemisphere 46.1
Entorhinal gyrus
nTPM: 49.6
2117 Female, age 91, right hemisphere 58.1
1938 Female, age 85, left hemisphere 53.5
1787 Male, age 76, left hemisphere 50.2
2764 Male, age 80, right hemisphere 48.3
2686 Male, age 75, right hemisphere 45.2
2613 Female, age 94, left hemisphere 42.5
Hippocampus, CA1
nTPM: 57.4
2749 Male, age 80, left hemisphere 68.5
1873 Female, age 85, both hemispheres 58.8
2527 Male, age 74, both hemispheres 56.4
2045 Male, age 76, both hemispheres 56.0
2082 Female, age 91, right hemisphere 47.4
Hippocampus, CA2
nTPM: 51.9
1892 Male, age 76, both hemispheres 57.1
2249 Male, age 74, both hemispheres 54.1
1963 Male, age 80, left hemisphere 53.3
1940 Female, age 85, left hemisphere 51.4
2113 Female, age 91, right hemisphere 48.7
2437 Female, age 94, left hemisphere 46.6
Hippocampus, CA3
nTPM: 57.8
2137 Male, age 80, left hemisphere 65.7
1867 Male, age 76, both hemispheres 63.0
2620 Female, age 94, left hemisphere 59.3
1891 Female, age 85, both hemispheres 57.5
2436 Male, age 74, both hemispheres 53.6
2861 Female, age 67, both hemispheres 47.6
Parahippocampal cortex
nTPM: 53.0
1850 Male, age 80, both hemispheres 59.1
2245 Female, age 91, both hemispheres 55.8
2018 Male, age 76, both hemispheres 55.3
2250 Female, age 67, right hemisphere 54.7
1933 Female, age 85, both hemispheres 53.1
2532 Female, age 72, left hemisphere 52.6
2693 Female, age 94, both hemispheres 52.5
1990 Female, age 91, right hemisphere 50.1
2692 Male, age 74, both hemispheres 50.0
2622 Female, age 67, right hemisphere 47.1
Perirhinal gyrus
nTPM: 55.8
1841 Female, age 85, right hemisphere 60.6
2521 Female, age 94, right hemisphere 58.3
1794 Male, age 80, right hemisphere 56.5
1847 Female, age 91, left hemisphere 53.1
2848 Male, age 76, right hemisphere 50.8
Subiculum
nTPM: 54.4
1901 Male, age 80, both hemispheres 56.7
2042 Male, age 76, both hemispheres 56.5
2438 Female, age 94, left hemisphere 54.8
2619 Male, age 74, both hemispheres 54.2
1977 Female, age 85, both hemispheres 52.4
2729 Female, age 91, right hemisphere 51.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 33.7
Min nTPM: 12.9
Std nTPM: 3.6
Median nTPM: 20.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 33.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 33.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 31.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 31.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 31.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 30.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 29.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 28.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 28.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 27.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 27.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.5
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 76.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.2
Pig sample Sample description nTPM
Subiculum
nTPM: 55.6
Samples: 4

Max nTPM: 69.5
Min nTPM: 49.9
Sample A Female 69.5
Sample B Female 52.5
Sample C Male 50.3
Sample D Male 49.9
Dorsal hippocampus
nTPM: 67.2
Samples: 4

Max nTPM: 83.9
Min nTPM: 59.7
Sample A Female 83.9
Sample B Female 62.1
Sample C Male 63.1
Sample D Male 59.7
Entorhinal cortex
nTPM: 56.9
Samples: 4

Max nTPM: 62.0
Min nTPM: 49.9
Sample A Female 62.0
Sample B Female 60.0
Sample C Male 55.6
Sample D Male 49.9
Ventral hippocampus
nTPM: 58.0
Samples: 4

Max nTPM: 62.7
Min nTPM: 48.4
Sample A Female 61.0
Sample B Female 48.4
Sample C Male 60.0
Sample D Male 62.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.8
Samples: 4

Max nTPM: 62.0
Min nTPM: 55.6
Sample A Male 57.7
Sample B Male 55.6
Sample C Female 59.8
Sample D Female 62.0
Hippocampal formation
nTPM: 63.6
Samples: 4

Max nTPM: 71.7
Min nTPM: 60.1
Sample A Male 60.8
Sample B Male 61.7
Sample C Female 71.7
Sample D Female 60.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
71763786 Antisense, RP_050921_02_F06, Mouse strain C57BL/6J (56 days, male) 3.3

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