HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:2.4 nTPM
HPA Brain:28.9 nTPM
GTEx:2.4 nTPM
FANTOM5:6.9 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:5.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009285Antibody HPA017139Antibody CAB017826
Glial cells Not detectedLowLow
Neuronal cells Not detectedNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 20.7
1855 Male, age 76, left hemisphere 26.3
2621 Female, age 67, right hemisphere 21.8
2529 Female, age 94, left hemisphere 21.7
1898 Male, age 80, left hemisphere 20.6
2148 Female, age 91, left hemisphere 18.6
1911 Female, age 85, right hemisphere 15.5
Dentate gyrus
nTPM: 21.3
2246 Female, age 85, both hemispheres 25.3
2010 Male, age 76, both hemispheres 24.4
2531 Female, age 67, both hemispheres 22.7
2528 Male, age 74, both hemispheres 21.0
1927 Female, age 91, both hemispheres 18.0
2530 Female, age 94, left hemisphere 16.2
Entorhinal gyrus
nTPM: 28.9
2613 Female, age 94, left hemisphere 38.9
2686 Male, age 75, right hemisphere 33.4
2764 Male, age 80, right hemisphere 29.3
1787 Male, age 76, left hemisphere 24.3
2117 Female, age 91, right hemisphere 24.3
1938 Female, age 85, left hemisphere 23.1
Hippocampus, CA1
nTPM: 22.2
2082 Female, age 91, right hemisphere 31.6
2045 Male, age 76, both hemispheres 24.3
2527 Male, age 74, both hemispheres 20.5
2749 Male, age 80, left hemisphere 18.0
1873 Female, age 85, both hemispheres 16.7
Hippocampus, CA2
nTPM: 22.7
1940 Female, age 85, left hemisphere 34.2
2437 Female, age 94, left hemisphere 23.9
2113 Female, age 91, right hemisphere 23.4
2249 Male, age 74, both hemispheres 19.5
1892 Male, age 76, both hemispheres 19.3
1963 Male, age 80, left hemisphere 15.8
Hippocampus, CA3
nTPM: 20.8
1867 Male, age 76, both hemispheres 28.4
2436 Male, age 74, both hemispheres 23.5
2861 Female, age 67, both hemispheres 22.5
1891 Female, age 85, both hemispheres 17.5
2137 Male, age 80, left hemisphere 16.7
2620 Female, age 94, left hemisphere 15.9
Parahippocampal cortex
nTPM: 27.8
2622 Female, age 67, right hemisphere 35.0
2250 Female, age 67, right hemisphere 31.6
2693 Female, age 94, both hemispheres 31.4
2018 Male, age 76, both hemispheres 31.2
1933 Female, age 85, both hemispheres 28.0
2532 Female, age 72, left hemisphere 26.1
2245 Female, age 91, both hemispheres 24.1
1990 Female, age 91, right hemisphere 24.0
1850 Male, age 80, both hemispheres 23.9
2692 Male, age 74, both hemispheres 23.2
Perirhinal gyrus
nTPM: 28.0
2848 Male, age 76, right hemisphere 32.4
1794 Male, age 80, right hemisphere 30.2
1847 Female, age 91, left hemisphere 27.5
2521 Female, age 94, right hemisphere 26.6
1841 Female, age 85, right hemisphere 23.1
Subiculum
nTPM: 21.9
2729 Female, age 91, right hemisphere 28.5
2042 Male, age 76, both hemispheres 25.3
2619 Male, age 74, both hemispheres 23.6
1977 Female, age 85, both hemispheres 22.7
1901 Male, age 80, both hemispheres 17.3
2438 Female, age 94, left hemisphere 13.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.4
Samples: 197

Max nTPM: 15.1
Min nTPM: 0.2
Std nTPM: 1.4
Median nTPM: 2.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 15.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 6.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 5.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 5.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 5.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 4.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 4.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 4.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 4.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 4.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 4.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.9
FF:10153-102I9 76 years, female 10.8
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.0
Pig sample Sample description nTPM
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 9.8
Min nTPM: 8.1
Sample A Female 9.8
Sample B Female 8.1
Sample C Male 9.2
Sample D Male 9.0
Dorsal hippocampus
nTPM: 8.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.1
Sample A Female 7.1
Sample B Female 8.5
Sample C Male 7.7
Sample D Male 9.6
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 11.2
Min nTPM: 8.7
Sample A Female 11.2
Sample B Female 8.7
Sample C Male 10.4
Sample D Male 9.5
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.5
Sample A Female 7.5
Sample B Female 8.9
Sample C Male 10.7
Sample D Male 8.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.3
Samples: 4

Max nTPM: 6.7
Min nTPM: 4.0
Sample A Male 5.4
Sample B Male 5.0
Sample C Female 4.0
Sample D Female 6.7
Hippocampal formation
nTPM: 4.9
Samples: 4

Max nTPM: 5.5
Min nTPM: 4.0
Sample A Male 5.4
Sample B Male 4.7
Sample C Female 5.5
Sample D Female 4.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68633351 Antisense, RP_050125_02_G01, Mouse strain C57BL/6J (56 days, male) 0.4

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