HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:12.1 nTPM
HPA Brain:43.4 nTPM
GTEx:12.1 nTPM
FANTOM5:56.8 Scaled Tags Per Million
Pig:32.7 nTPM
Mouse:21.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018104Antibody HPA018189
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.1
1911 Female, age 85, right hemisphere 37.7
1898 Male, age 80, left hemisphere 35.0
2529 Female, age 94, left hemisphere 31.6
1855 Male, age 76, left hemisphere 29.6
2148 Female, age 91, left hemisphere 29.5
2621 Female, age 67, right hemisphere 28.9
Dentate gyrus
nTPM: 33.9
2530 Female, age 94, left hemisphere 40.0
2010 Male, age 76, both hemispheres 37.9
2528 Male, age 74, both hemispheres 35.0
2246 Female, age 85, both hemispheres 32.8
1927 Female, age 91, both hemispheres 31.7
2531 Female, age 67, both hemispheres 25.9
Entorhinal gyrus
nTPM: 35.3
2117 Female, age 91, right hemisphere 46.0
1938 Female, age 85, left hemisphere 36.8
1787 Male, age 76, left hemisphere 33.6
2764 Male, age 80, right hemisphere 32.4
2686 Male, age 75, right hemisphere 31.6
2613 Female, age 94, left hemisphere 31.2
Hippocampus, CA1
nTPM: 31.2
1873 Female, age 85, both hemispheres 37.8
2527 Male, age 74, both hemispheres 33.5
2082 Female, age 91, right hemisphere 30.7
2045 Male, age 76, both hemispheres 27.7
2749 Male, age 80, left hemisphere 26.2
Hippocampus, CA2
nTPM: 33.8
2249 Male, age 74, both hemispheres 39.1
1963 Male, age 80, left hemisphere 34.3
2113 Female, age 91, right hemisphere 33.5
1940 Female, age 85, left hemisphere 32.3
2437 Female, age 94, left hemisphere 32.3
1892 Male, age 76, both hemispheres 31.5
Hippocampus, CA3
nTPM: 30.8
1891 Female, age 85, both hemispheres 46.0
1867 Male, age 76, both hemispheres 33.5
2436 Male, age 74, both hemispheres 33.3
2137 Male, age 80, left hemisphere 26.9
2861 Female, age 67, both hemispheres 23.9
2620 Female, age 94, left hemisphere 21.2
Parahippocampal cortex
nTPM: 34.0
2532 Female, age 72, left hemisphere 40.2
2018 Male, age 76, both hemispheres 38.6
1850 Male, age 80, both hemispheres 38.2
2692 Male, age 74, both hemispheres 37.3
1933 Female, age 85, both hemispheres 37.0
1990 Female, age 91, right hemisphere 36.8
2693 Female, age 94, both hemispheres 32.4
2250 Female, age 67, right hemisphere 29.7
2245 Female, age 91, both hemispheres 26.7
2622 Female, age 67, right hemisphere 23.1
Perirhinal gyrus
nTPM: 29.1
1841 Female, age 85, right hemisphere 33.1
2521 Female, age 94, right hemisphere 29.8
1847 Female, age 91, left hemisphere 28.3
1794 Male, age 80, right hemisphere 27.7
2848 Male, age 76, right hemisphere 26.7
Subiculum
nTPM: 43.4
2042 Male, age 76, both hemispheres 53.0
2438 Female, age 94, left hemisphere 52.8
1901 Male, age 80, both hemispheres 44.3
2729 Female, age 91, right hemisphere 38.2
1977 Female, age 85, both hemispheres 38.0
2619 Male, age 74, both hemispheres 34.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 34.9
Min nTPM: 0.4
Std nTPM: 6.1
Median nTPM: 11.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 34.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 30.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 28.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 25.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 25.1
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 25.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 25.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 24.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 24.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 23.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.8
FF:10153-102I9 76 years, female 58.5
FF:10169-103B7 60 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.7
Pig sample Sample description nTPM
Subiculum
nTPM: 28.9
Samples: 4

Max nTPM: 30.1
Min nTPM: 27.6
Sample A Female 27.6
Sample B Female 29.7
Sample C Male 28.3
Sample D Male 30.1
Dorsal hippocampus
nTPM: 32.7
Samples: 4

Max nTPM: 35.5
Min nTPM: 29.8
Sample A Female 35.5
Sample B Female 31.8
Sample C Male 33.6
Sample D Male 29.8
Entorhinal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 32.9
Min nTPM: 28.6
Sample A Female 29.8
Sample B Female 32.9
Sample C Male 29.9
Sample D Male 28.6
Ventral hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 34.0
Min nTPM: 25.0
Sample A Female 34.0
Sample B Female 30.9
Sample C Male 25.0
Sample D Male 30.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.6
Min nTPM: 19.1
Sample A Male 21.2
Sample B Male 19.5
Sample C Female 19.1
Sample D Female 22.6
Hippocampal formation
nTPM: 21.1
Samples: 4

Max nTPM: 23.4
Min nTPM: 19.6
Sample A Male 20.7
Sample B Male 20.5
Sample C Female 23.4
Sample D Female 19.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68444952 Antisense, RP_050111_02_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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