HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:21.6 nTPM
HPA Brain:31.9 nTPM
GTEx:21.6 nTPM
FANTOM5:97.2 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:45.5 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004883
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.0
2621 Female, age 67, right hemisphere 32.3
1898 Male, age 80, left hemisphere 32.2
2529 Female, age 94, left hemisphere 30.8
2148 Female, age 91, left hemisphere 28.6
1855 Male, age 76, left hemisphere 25.3
1911 Female, age 85, right hemisphere 25.0
Dentate gyrus
nTPM: 29.1
2531 Female, age 67, both hemispheres 32.4
2246 Female, age 85, both hemispheres 29.9
2530 Female, age 94, left hemisphere 29.9
1927 Female, age 91, both hemispheres 29.0
2010 Male, age 76, both hemispheres 27.3
2528 Male, age 74, both hemispheres 25.9
Entorhinal gyrus
nTPM: 30.8
2686 Male, age 75, right hemisphere 36.4
1787 Male, age 76, left hemisphere 32.5
1938 Female, age 85, left hemisphere 31.9
2764 Male, age 80, right hemisphere 29.8
2117 Female, age 91, right hemisphere 28.7
2613 Female, age 94, left hemisphere 25.4
Hippocampus, CA1
nTPM: 30.4
2749 Male, age 80, left hemisphere 37.5
1873 Female, age 85, both hemispheres 32.2
2045 Male, age 76, both hemispheres 31.5
2527 Male, age 74, both hemispheres 27.3
2082 Female, age 91, right hemisphere 23.6
Hippocampus, CA2
nTPM: 27.2
1892 Male, age 76, both hemispheres 33.4
2437 Female, age 94, left hemisphere 27.6
1940 Female, age 85, left hemisphere 26.7
1963 Male, age 80, left hemisphere 26.7
2113 Female, age 91, right hemisphere 24.7
2249 Male, age 74, both hemispheres 24.2
Hippocampus, CA3
nTPM: 27.5
2137 Male, age 80, left hemisphere 31.7
2861 Female, age 67, both hemispheres 29.0
1867 Male, age 76, both hemispheres 27.9
2620 Female, age 94, left hemisphere 26.4
1891 Female, age 85, both hemispheres 26.0
2436 Male, age 74, both hemispheres 24.2
Parahippocampal cortex
nTPM: 30.6
1850 Male, age 80, both hemispheres 36.2
2532 Female, age 72, left hemisphere 33.8
2622 Female, age 67, right hemisphere 33.8
2245 Female, age 91, both hemispheres 33.5
1933 Female, age 85, both hemispheres 30.1
2692 Male, age 74, both hemispheres 29.2
2250 Female, age 67, right hemisphere 29.0
2018 Male, age 76, both hemispheres 28.5
1990 Female, age 91, right hemisphere 26.1
2693 Female, age 94, both hemispheres 25.4
Perirhinal gyrus
nTPM: 31.9
1794 Male, age 80, right hemisphere 35.5
1841 Female, age 85, right hemisphere 33.8
2848 Male, age 76, right hemisphere 32.4
1847 Female, age 91, left hemisphere 30.5
2521 Female, age 94, right hemisphere 27.2
Subiculum
nTPM: 30.1
1901 Male, age 80, both hemispheres 33.5
2438 Female, age 94, left hemisphere 32.1
1977 Female, age 85, both hemispheres 31.1
2042 Male, age 76, both hemispheres 30.7
2619 Male, age 74, both hemispheres 27.4
2729 Female, age 91, right hemisphere 25.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.6
Samples: 197

Max nTPM: 57.7
Min nTPM: 10.9
Std nTPM: 7.2
Median nTPM: 19.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 57.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 44.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 41.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 41.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 40.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 39.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 38.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 38.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 37.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 36.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 36.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.2
FF:10169-103B7 60 years, female 119.4
FF:10153-102I9 76 years, female 75.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.0
Pig sample Sample description nTPM
Subiculum
nTPM: 37.0
Samples: 4

Max nTPM: 39.8
Min nTPM: 35.4
Sample A Female 39.8
Sample B Female 35.4
Sample C Male 36.3
Sample D Male 36.6
Dorsal hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 39.0
Min nTPM: 33.7
Sample A Female 33.9
Sample B Female 33.7
Sample C Male 36.0
Sample D Male 39.0
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 37.8
Min nTPM: 35.5
Sample A Female 35.5
Sample B Female 37.6
Sample C Male 36.2
Sample D Male 37.8
Ventral hippocampus
nTPM: 32.4
Samples: 4

Max nTPM: 36.3
Min nTPM: 26.5
Sample A Female 33.9
Sample B Female 36.3
Sample C Male 26.5
Sample D Male 32.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 48.3
Min nTPM: 41.1
Sample A Male 41.1
Sample B Male 44.7
Sample C Female 44.8
Sample D Female 48.3
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 46.9
Min nTPM: 44.1
Sample A Male 44.1
Sample B Male 46.9
Sample C Female 46.4
Sample D Female 44.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
71325270 Antisense, RP_050825_02_E04, Mouse strain C57BL/6J (56 days, male) 11.4

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