HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:11.2 nTPM
HPA Brain:28.8 nTPM
GTEx:11.2 nTPM
FANTOM5:18.5 Scaled Tags Per Million
Pig:15.0 nTPM
Mouse:7.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027146
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.5
1911 Female, age 85, right hemisphere 26.8
2529 Female, age 94, left hemisphere 25.6
1855 Male, age 76, left hemisphere 22.3
2621 Female, age 67, right hemisphere 19.1
1898 Male, age 80, left hemisphere 19.0
2148 Female, age 91, left hemisphere 16.4
Dentate gyrus
nTPM: 19.3
2010 Male, age 76, both hemispheres 27.2
2530 Female, age 94, left hemisphere 23.2
2246 Female, age 85, both hemispheres 20.2
2528 Male, age 74, both hemispheres 17.0
1927 Female, age 91, both hemispheres 14.2
2531 Female, age 67, both hemispheres 14.1
Entorhinal gyrus
nTPM: 22.3
2117 Female, age 91, right hemisphere 27.3
2613 Female, age 94, left hemisphere 23.1
1787 Male, age 76, left hemisphere 22.2
1938 Female, age 85, left hemisphere 20.9
2764 Male, age 80, right hemisphere 20.9
2686 Male, age 75, right hemisphere 19.5
Hippocampus, CA1
nTPM: 19.2
2082 Female, age 91, right hemisphere 23.1
2527 Male, age 74, both hemispheres 22.1
1873 Female, age 85, both hemispheres 19.8
2045 Male, age 76, both hemispheres 17.7
2749 Male, age 80, left hemisphere 13.0
Hippocampus, CA2
nTPM: 21.2
2113 Female, age 91, right hemisphere 24.9
2249 Male, age 74, both hemispheres 24.7
1940 Female, age 85, left hemisphere 24.5
2437 Female, age 94, left hemisphere 21.2
1963 Male, age 80, left hemisphere 17.6
1892 Male, age 76, both hemispheres 14.3
Hippocampus, CA3
nTPM: 22.1
2436 Male, age 74, both hemispheres 35.3
1891 Female, age 85, both hemispheres 31.9
1867 Male, age 76, both hemispheres 22.5
2620 Female, age 94, left hemisphere 15.5
2137 Male, age 80, left hemisphere 14.5
2861 Female, age 67, both hemispheres 13.1
Parahippocampal cortex
nTPM: 22.7
2018 Male, age 76, both hemispheres 28.4
2692 Male, age 74, both hemispheres 27.3
1990 Female, age 91, right hemisphere 24.9
2693 Female, age 94, both hemispheres 23.6
1850 Male, age 80, both hemispheres 22.3
2532 Female, age 72, left hemisphere 21.3
1933 Female, age 85, both hemispheres 21.2
2250 Female, age 67, right hemisphere 20.3
2622 Female, age 67, right hemisphere 19.2
2245 Female, age 91, both hemispheres 18.1
Perirhinal gyrus
nTPM: 18.5
2521 Female, age 94, right hemisphere 20.4
2848 Male, age 76, right hemisphere 19.6
1841 Female, age 85, right hemisphere 18.9
1847 Female, age 91, left hemisphere 16.9
1794 Male, age 80, right hemisphere 16.7
Subiculum
nTPM: 28.8
2042 Male, age 76, both hemispheres 43.8
1901 Male, age 80, both hemispheres 30.5
1977 Female, age 85, both hemispheres 27.9
2438 Female, age 94, left hemisphere 24.7
2619 Male, age 74, both hemispheres 24.7
2729 Female, age 91, right hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.2
Samples: 197

Max nTPM: 34.5
Min nTPM: 2.6
Std nTPM: 5.7
Median nTPM: 9.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 34.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 33.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 29.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 28.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 25.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 24.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 24.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 23.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.5
FF:10153-102I9 76 years, female 22.5
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.0
Pig sample Sample description nTPM
Subiculum
nTPM: 13.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.4
Sample A Female 16.3
Sample B Female 12.7
Sample C Male 13.1
Sample D Male 12.4
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.5
Min nTPM: 9.5
Sample A Female 16.5
Sample B Female 14.5
Sample C Male 14.4
Sample D Male 9.5
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 18.7
Min nTPM: 12.8
Sample A Female 13.3
Sample B Female 18.7
Sample C Male 15.1
Sample D Male 12.8
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 16.5
Min nTPM: 9.6
Sample A Female 10.8
Sample B Female 11.5
Sample C Male 9.6
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.5
Sample A Male 8.5
Sample B Male 7.5
Sample C Female 6.5
Sample D Female 6.6
Hippocampal formation
nTPM: 7.9
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.4
Sample A Male 7.1
Sample B Male 6.4
Sample C Female 8.9
Sample D Female 9.1

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