HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:17.9 nTPM
HPA Brain:50.1 nTPM
GTEx:17.9 nTPM
FANTOM5:53.7 Scaled Tags Per Million
Pig:91.7 nTPM
Mouse:158.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049851Antibody HPA049974
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.1
1898 Male, age 80, left hemisphere 43.5
2148 Female, age 91, left hemisphere 36.6
1855 Male, age 76, left hemisphere 32.7
2621 Female, age 67, right hemisphere 31.3
1911 Female, age 85, right hemisphere 28.6
2529 Female, age 94, left hemisphere 25.8
Dentate gyrus
nTPM: 39.5
1927 Female, age 91, both hemispheres 49.7
2528 Male, age 74, both hemispheres 40.8
2531 Female, age 67, both hemispheres 39.5
2010 Male, age 76, both hemispheres 38.2
2246 Female, age 85, both hemispheres 34.8
2530 Female, age 94, left hemisphere 34.0
Entorhinal gyrus
nTPM: 41.0
2764 Male, age 80, right hemisphere 49.5
1938 Female, age 85, left hemisphere 47.3
2613 Female, age 94, left hemisphere 42.5
1787 Male, age 76, left hemisphere 42.1
2686 Male, age 75, right hemisphere 35.6
2117 Female, age 91, right hemisphere 28.9
Hippocampus, CA1
nTPM: 38.8
2749 Male, age 80, left hemisphere 51.9
2045 Male, age 76, both hemispheres 40.5
2527 Male, age 74, both hemispheres 36.1
1873 Female, age 85, both hemispheres 35.1
2082 Female, age 91, right hemisphere 30.2
Hippocampus, CA2
nTPM: 36.1
1892 Male, age 76, both hemispheres 50.0
2249 Male, age 74, both hemispheres 47.4
1963 Male, age 80, left hemisphere 35.4
1940 Female, age 85, left hemisphere 28.8
2113 Female, age 91, right hemisphere 27.3
2437 Female, age 94, left hemisphere 27.3
Hippocampus, CA3
nTPM: 47.0
2436 Male, age 74, both hemispheres 64.9
2620 Female, age 94, left hemisphere 54.3
2137 Male, age 80, left hemisphere 47.4
1867 Male, age 76, both hemispheres 44.0
2861 Female, age 67, both hemispheres 37.5
1891 Female, age 85, both hemispheres 33.7
Parahippocampal cortex
nTPM: 38.5
1990 Female, age 91, right hemisphere 55.6
1850 Male, age 80, both hemispheres 51.7
2250 Female, age 67, right hemisphere 43.6
1933 Female, age 85, both hemispheres 40.0
2245 Female, age 91, both hemispheres 36.2
2693 Female, age 94, both hemispheres 35.4
2532 Female, age 72, left hemisphere 34.6
2018 Male, age 76, both hemispheres 32.3
2622 Female, age 67, right hemisphere 32.1
2692 Male, age 74, both hemispheres 23.7
Perirhinal gyrus
nTPM: 50.1
1847 Female, age 91, left hemisphere 71.0
1794 Male, age 80, right hemisphere 51.5
1841 Female, age 85, right hemisphere 44.9
2521 Female, age 94, right hemisphere 42.4
2848 Male, age 76, right hemisphere 40.8
Subiculum
nTPM: 31.6
1977 Female, age 85, both hemispheres 45.1
1901 Male, age 80, both hemispheres 35.7
2619 Male, age 74, both hemispheres 31.6
2729 Female, age 91, right hemisphere 29.5
2438 Female, age 94, left hemisphere 24.4
2042 Male, age 76, both hemispheres 23.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 48.5
Min nTPM: 2.2
Std nTPM: 10.0
Median nTPM: 16.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 48.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 48.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 48.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 43.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 38.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 37.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 37.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 36.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 36.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.7
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 35.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.7
Pig sample Sample description nTPM
Subiculum
nTPM: 81.7
Samples: 4

Max nTPM: 103.4
Min nTPM: 72.7
Sample A Female 103.4
Sample B Female 76.8
Sample C Male 72.7
Sample D Male 73.8
Dorsal hippocampus
nTPM: 91.7
Samples: 4

Max nTPM: 107.5
Min nTPM: 74.9
Sample A Female 107.5
Sample B Female 99.8
Sample C Male 74.9
Sample D Male 84.6
Entorhinal cortex
nTPM: 76.6
Samples: 4

Max nTPM: 87.0
Min nTPM: 59.6
Sample A Female 82.7
Sample B Female 87.0
Sample C Male 77.1
Sample D Male 59.6
Ventral hippocampus
nTPM: 80.4
Samples: 4

Max nTPM: 93.6
Min nTPM: 66.4
Sample A Female 93.6
Sample B Female 66.4
Sample C Male 82.7
Sample D Male 78.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 158.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.5
Samples: 4

Max nTPM: 174.3
Min nTPM: 145.4
Sample A Male 145.4
Sample B Male 174.3
Sample C Female 153.0
Sample D Female 161.3
Hippocampal formation
nTPM: 137.7
Samples: 4

Max nTPM: 165.9
Min nTPM: 126.5
Sample A Male 165.9
Sample B Male 126.5
Sample C Female 128.8
Sample D Female 129.4

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