HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:106.4 nTPM
HPA Brain:156.7 nTPM
GTEx:106.4 nTPM
FANTOM5:112.6 Scaled Tags Per Million
Pig:113.1 nTPM
Mouse:48.5 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068767
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 156.7
Sample id Sample description nTPM
Hippocampus
nTPM: 144.6
2621 Female, age 67, right hemisphere 190.3
1855 Male, age 76, left hemisphere 150.2
2529 Female, age 94, left hemisphere 145.0
1898 Male, age 80, left hemisphere 144.7
2148 Female, age 91, left hemisphere 122.3
1911 Female, age 85, right hemisphere 115.2
Dentate gyrus
nTPM: 128.2
2530 Female, age 94, left hemisphere 163.9
2010 Male, age 76, both hemispheres 134.3
2531 Female, age 67, both hemispheres 126.5
2246 Female, age 85, both hemispheres 125.5
1927 Female, age 91, both hemispheres 122.0
2528 Male, age 74, both hemispheres 97.1
Entorhinal gyrus
nTPM: 156.7
2613 Female, age 94, left hemisphere 199.6
1787 Male, age 76, left hemisphere 155.6
2764 Male, age 80, right hemisphere 154.3
2686 Male, age 75, right hemisphere 152.0
1938 Female, age 85, left hemisphere 146.4
2117 Female, age 91, right hemisphere 132.2
Hippocampus, CA1
nTPM: 130.0
2749 Male, age 80, left hemisphere 160.9
1873 Female, age 85, both hemispheres 135.0
2527 Male, age 74, both hemispheres 132.8
2045 Male, age 76, both hemispheres 112.9
2082 Female, age 91, right hemisphere 108.6
Hippocampus, CA2
nTPM: 132.7
1892 Male, age 76, both hemispheres 168.0
2437 Female, age 94, left hemisphere 152.7
1963 Male, age 80, left hemisphere 139.8
1940 Female, age 85, left hemisphere 125.7
2113 Female, age 91, right hemisphere 112.6
2249 Male, age 74, both hemispheres 97.5
Hippocampus, CA3
nTPM: 140.2
2861 Female, age 67, both hemispheres 179.3
2620 Female, age 94, left hemisphere 156.8
1867 Male, age 76, both hemispheres 133.4
2137 Male, age 80, left hemisphere 127.0
2436 Male, age 74, both hemispheres 126.8
1891 Female, age 85, both hemispheres 117.7
Parahippocampal cortex
nTPM: 150.7
2622 Female, age 67, right hemisphere 196.5
2245 Female, age 91, both hemispheres 170.0
2692 Male, age 74, both hemispheres 169.4
2693 Female, age 94, both hemispheres 147.4
2532 Female, age 72, left hemisphere 146.9
1850 Male, age 80, both hemispheres 145.3
1933 Female, age 85, both hemispheres 142.0
2250 Female, age 67, right hemisphere 132.1
1990 Female, age 91, right hemisphere 129.8
2018 Male, age 76, both hemispheres 127.7
Perirhinal gyrus
nTPM: 152.3
1794 Male, age 80, right hemisphere 166.5
1847 Female, age 91, left hemisphere 159.4
1841 Female, age 85, right hemisphere 146.9
2848 Male, age 76, right hemisphere 146.7
2521 Female, age 94, right hemisphere 141.9
Subiculum
nTPM: 138.8
2619 Male, age 74, both hemispheres 169.2
2438 Female, age 94, left hemisphere 167.6
1977 Female, age 85, both hemispheres 139.4
1901 Male, age 80, both hemispheres 134.6
2042 Male, age 76, both hemispheres 118.5
2729 Female, age 91, right hemisphere 103.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.4
Samples: 197

Max nTPM: 218.9
Min nTPM: 35.7
Std nTPM: 28.3
Median nTPM: 101.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 218.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 186.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 173.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 168.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 168.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 167.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 166.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 164.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 158.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 157.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 157.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.6
FF:10153-102I9 76 years, female 140.0
FF:10169-103B7 60 years, female 85.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.1
Pig sample Sample description nTPM
Subiculum
nTPM: 95.3
Samples: 4

Max nTPM: 119.5
Min nTPM: 83.1
Sample A Female 119.5
Sample B Female 87.2
Sample C Male 91.2
Sample D Male 83.1
Dorsal hippocampus
nTPM: 113.1
Samples: 4

Max nTPM: 149.0
Min nTPM: 79.7
Sample A Female 149.0
Sample B Female 113.6
Sample C Male 110.2
Sample D Male 79.7
Entorhinal cortex
nTPM: 92.7
Samples: 4

Max nTPM: 105.3
Min nTPM: 81.8
Sample A Female 105.3
Sample B Female 86.5
Sample C Male 97.0
Sample D Male 81.8
Ventral hippocampus
nTPM: 109.2
Samples: 4

Max nTPM: 133.0
Min nTPM: 69.2
Sample A Female 111.6
Sample B Female 69.2
Sample C Male 133.0
Sample D Male 123.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.2
Samples: 4

Max nTPM: 55.0
Min nTPM: 41.6
Sample A Male 43.3
Sample B Male 41.6
Sample C Female 44.7
Sample D Female 55.0
Hippocampal formation
nTPM: 48.5
Samples: 4

Max nTPM: 54.2
Min nTPM: 45.9
Sample A Male 47.6
Sample B Male 45.9
Sample C Female 54.2
Sample D Female 46.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
71608394 Antisense, RP_050927_01_F11, Mouse strain C57BL/6J (56 days, male) 13.9
544901 Antisense, RP_040617_02_G04, Mouse strain C57BL/6J (56 days, male) 11.5

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