We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
275.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 275.0
Samples: 152
Max nTPM: 685.3
Min nTPM: 5.3
Std nTPM: 173.9
Median nTPM: 249.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
685.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
685.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
646.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
619.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
612.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
607.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
602.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
593.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
588.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
581.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
569.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
569.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
567.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
559.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
536.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
532.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
522.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
521.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
516.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
513.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
511.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
489.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
489.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
485.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
466.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
460.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
458.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
444.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
444.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
434.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
430.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
427.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
426.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
419.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
417.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
412.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
399.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
394.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
390.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
389.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
384.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
384.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
383.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
377.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
375.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
375.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
374.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
361.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
356.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
354.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
348.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
346.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
344.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
343.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
340.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
323.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
318.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
318.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
317.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
316.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
315.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
314.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
310.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
309.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
308.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
301.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
297.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
295.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
294.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
289.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
287.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
277.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
271.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
271.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
266.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
252.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
245.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
241.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
240.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
235.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
234.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
231.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
226.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
222.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
219.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
215.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
210.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
204.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
196.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
195.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
189.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
189.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
187.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
177.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
174.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
173.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
171.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
171.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
170.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
157.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
153.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
146.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
146.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
145.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
145.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
145.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
143.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
139.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
133.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
130.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
130.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
129.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
127.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
126.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
125.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
123.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
118.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
118.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
118.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
117.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
106.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
103.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
103.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
100.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
97.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
95.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
94.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
93.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
91.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
90.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
89.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
87.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
82.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
78.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
74.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
72.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
71.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
67.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
66.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
61.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
55.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
54.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
52.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
45.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
41.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
40.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
37.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
31.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
20.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
14.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
5.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
5.3
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
753.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 753.7
Samples: 4
Max nTPM: 778.0
Min nTPM: 727.5
Sample A
Male
778.0
Sample B
Male
761.9
Sample C
Female
747.2
Sample D
Female
727.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.