HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:51.4 nTPM
HPA Brain:115.3 nTPM
GTEx:51.4 nTPM
FANTOM5:47.4 Scaled Tags Per Million
Pig:39.2 nTPM
Mouse:66.9 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043989
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 115.3
Sample id Sample description nTPM
Hippocampus
nTPM: 115.3
2621 Female, age 67, right hemisphere 147.4
2148 Female, age 91, left hemisphere 117.4
1855 Male, age 76, left hemisphere 114.4
1898 Male, age 80, left hemisphere 107.5
2529 Female, age 94, left hemisphere 106.4
1911 Female, age 85, right hemisphere 98.7
Dentate gyrus
nTPM: 112.2
2530 Female, age 94, left hemisphere 135.2
1927 Female, age 91, both hemispheres 123.8
2531 Female, age 67, both hemispheres 122.6
2010 Male, age 76, both hemispheres 103.1
2528 Male, age 74, both hemispheres 94.8
2246 Female, age 85, both hemispheres 94.0
Entorhinal gyrus
nTPM: 78.0
2613 Female, age 94, left hemisphere 95.9
2764 Male, age 80, right hemisphere 80.0
2686 Male, age 75, right hemisphere 76.4
1787 Male, age 76, left hemisphere 72.6
1938 Female, age 85, left hemisphere 71.5
2117 Female, age 91, right hemisphere 71.4
Hippocampus, CA1
nTPM: 108.0
2749 Male, age 80, left hemisphere 138.2
2527 Male, age 74, both hemispheres 120.1
1873 Female, age 85, both hemispheres 113.6
2082 Female, age 91, right hemisphere 94.5
2045 Male, age 76, both hemispheres 73.4
Hippocampus, CA2
nTPM: 109.6
1963 Male, age 80, left hemisphere 192.6
2113 Female, age 91, right hemisphere 102.9
1892 Male, age 76, both hemispheres 102.6
2437 Female, age 94, left hemisphere 95.4
2249 Male, age 74, both hemispheres 82.4
1940 Female, age 85, left hemisphere 81.5
Hippocampus, CA3
nTPM: 109.3
2861 Female, age 67, both hemispheres 174.1
2137 Male, age 80, left hemisphere 128.4
2620 Female, age 94, left hemisphere 108.7
2436 Male, age 74, both hemispheres 95.0
1867 Male, age 76, both hemispheres 79.7
1891 Female, age 85, both hemispheres 69.6
Parahippocampal cortex
nTPM: 83.4
2245 Female, age 91, both hemispheres 123.4
2622 Female, age 67, right hemisphere 91.4
2250 Female, age 67, right hemisphere 87.0
2532 Female, age 72, left hemisphere 85.2
2693 Female, age 94, both hemispheres 80.7
2018 Male, age 76, both hemispheres 80.5
1933 Female, age 85, both hemispheres 80.2
1850 Male, age 80, both hemispheres 69.4
2692 Male, age 74, both hemispheres 69.1
1990 Female, age 91, right hemisphere 67.6
Perirhinal gyrus
nTPM: 81.6
2521 Female, age 94, right hemisphere 105.8
1847 Female, age 91, left hemisphere 86.4
1794 Male, age 80, right hemisphere 81.9
1841 Female, age 85, right hemisphere 74.2
2848 Male, age 76, right hemisphere 60.0
Subiculum
nTPM: 74.8
2729 Female, age 91, right hemisphere 85.4
2042 Male, age 76, both hemispheres 78.1
1901 Male, age 80, both hemispheres 76.0
2619 Male, age 74, both hemispheres 75.6
1977 Female, age 85, both hemispheres 68.9
2438 Female, age 94, left hemisphere 64.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.4
Samples: 197

Max nTPM: 186.3
Min nTPM: 13.1
Std nTPM: 25.3
Median nTPM: 46.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 186.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 120.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 114.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 113.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 111.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 106.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 106.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 104.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 103.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 103.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 97.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.4
FF:10153-102I9 76 years, female 63.6
FF:10169-103B7 60 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.2
Pig sample Sample description nTPM
Subiculum
nTPM: 35.1
Samples: 4

Max nTPM: 45.0
Min nTPM: 29.7
Sample A Female 45.0
Sample B Female 31.7
Sample C Male 34.0
Sample D Male 29.7
Dorsal hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 47.9
Min nTPM: 29.8
Sample A Female 47.9
Sample B Female 41.7
Sample C Male 36.2
Sample D Male 29.8
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 41.9
Min nTPM: 34.8
Sample A Female 39.7
Sample B Female 34.8
Sample C Male 41.9
Sample D Male 37.0
Ventral hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 47.1
Min nTPM: 28.5
Sample A Female 37.2
Sample B Female 28.5
Sample C Male 47.1
Sample D Male 43.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.9
Samples: 4

Max nTPM: 72.4
Min nTPM: 64.1
Sample A Male 66.2
Sample B Male 64.1
Sample C Female 64.7
Sample D Female 72.4
Hippocampal formation
nTPM: 66.5
Samples: 4

Max nTPM: 69.0
Min nTPM: 61.9
Sample A Male 66.8
Sample B Male 61.9
Sample C Female 68.2
Sample D Female 69.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68911023 Antisense, RP_050203_02_G03, Mouse strain C57BL/6J (56 days, male) 9.5

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