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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
66.1
nTPM
HPA Brain:
20.3
nTPM
GTEx:
66.1
nTPM
FANTOM5:
50.1
Scaled Tags Per Million
Pig:
12.0
nTPM
Mouse:
42.0
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
20.3
Sample id
Sample description
nTPM
Amygdala nTPM: 18.2
2695
Female, age 67, right hemisphere
22.1
2517
Female, age 94, left hemisphere
20.0
2514
Male, age 75, right hemisphere
17.6
1987
Female, age 91, left hemisphere
16.6
2814
Male, age 76, right hemisphere
14.5
Basal amygdala nTPM: 17.2
2827
Female, age 67, right hemisphere
26.5
2609
Male, age 75, right hemisphere
17.4
2685
Female, age 94, left hemisphere
15.8
2110
Male, age 80, left hemisphere
15.6
2243
Female, age 91, right hemisphere
15.0
1955
Male, age 76, both hemispheres
12.6
Central amygdala nTPM: 17.3
2826
Female, age 94, left hemisphere
30.2
2515
Male, age 75, right hemisphere
16.1
2239
Male, age 80, left hemisphere
15.8
2701
Female, age 91, right hemisphere
12.9
1905
Male, age 76, both hemispheres
11.8
Corticomedial amygdala nTPM: 15.4
2535
Female, age 67, right hemisphere
20.5
2428
Male, age 75, right hemisphere
16.4
2429
Female, age 94, left hemisphere
15.8
2240
Male, age 76, both hemispheres
13.9
2242
Female, age 91, right hemisphere
13.3
2829
Male, age 80, left hemisphere
12.7
Lateral amygdala nTPM: 20.3
2830
Female, age 67, right hemisphere
33.2
2534
Female, age 94, left hemisphere
22.7
2516
Male, age 75, right hemisphere
21.7
2256
Male, age 80, left hemisphere
17.6
2255
Female, age 91, right hemisphere
13.7
1883
Male, age 76, both hemispheres
13.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
66.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 66.1
Samples: 152
Max nTPM: 138.3
Min nTPM: 37.6
Std nTPM: 19.2
Median nTPM: 60.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
138.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
120.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
116.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
115.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
115.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
109.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
107.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
105.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
101.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
99.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
99.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
98.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
96.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
95.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
95.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
92.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
92.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
92.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
91.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
91.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
90.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
90.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
88.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
86.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
86.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
85.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
85.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
85.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
82.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
81.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
80.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
78.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
78.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
77.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
77.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
76.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
76.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
75.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
75.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
75.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
74.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
73.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
73.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
72.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
72.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
72.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
71.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
71.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
71.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
70.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
70.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
69.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
69.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
68.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
68.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
67.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
67.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
67.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
66.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
65.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
65.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
65.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
64.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
64.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
64.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
63.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
63.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
63.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
62.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
62.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
61.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
61.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
61.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
61.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
61.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
60.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
60.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
60.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
60.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
60.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
60.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
59.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
59.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
59.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
59.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
59.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
59.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
58.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
58.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
58.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
58.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
58.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
57.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
57.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
57.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
56.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
56.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
55.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
55.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
55.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
55.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
55.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
55.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
54.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
54.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
54.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
53.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
53.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
53.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
53.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
53.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
52.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
52.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
52.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
52.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
52.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
52.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
51.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
51.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
51.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
51.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
50.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
50.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
50.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
49.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
48.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
47.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
47.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
47.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
47.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
47.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
46.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
46.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
46.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
45.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
45.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
45.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
44.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
43.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
43.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
43.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
43.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
42.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
42.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
42.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
42.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
40.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
40.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
39.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
38.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
37.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.