HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:106.5 nTPM
HPA Brain:103.5 nTPM
GTEx:106.5 nTPM
FANTOM5:54.5 Scaled Tags Per Million
Pig:13.8 nTPM
Mouse:11.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.5
Sample id Sample description nTPM
Hippocampus
nTPM: 103.5
2621 Female, age 67, right hemisphere 134.4
1855 Male, age 76, left hemisphere 109.0
1898 Male, age 80, left hemisphere 106.2
2529 Female, age 94, left hemisphere 106.0
2148 Female, age 91, left hemisphere 86.6
1911 Female, age 85, right hemisphere 78.6
Dentate gyrus
nTPM: 86.2
2530 Female, age 94, left hemisphere 108.6
2010 Male, age 76, both hemispheres 96.9
1927 Female, age 91, both hemispheres 96.2
2531 Female, age 67, both hemispheres 86.6
2528 Male, age 74, both hemispheres 73.5
2246 Female, age 85, both hemispheres 55.3
Entorhinal gyrus
nTPM: 56.0
2613 Female, age 94, left hemisphere 81.8
2686 Male, age 75, right hemisphere 55.7
1787 Male, age 76, left hemisphere 52.4
2764 Male, age 80, right hemisphere 51.8
1938 Female, age 85, left hemisphere 50.1
2117 Female, age 91, right hemisphere 44.5
Hippocampus, CA1
nTPM: 87.6
2749 Male, age 80, left hemisphere 127.4
2527 Male, age 74, both hemispheres 115.2
1873 Female, age 85, both hemispheres 77.1
2082 Female, age 91, right hemisphere 64.2
2045 Male, age 76, both hemispheres 54.0
Hippocampus, CA2
nTPM: 99.5
1963 Male, age 80, left hemisphere 237.7
2437 Female, age 94, left hemisphere 93.1
1892 Male, age 76, both hemispheres 78.6
2113 Female, age 91, right hemisphere 76.8
2249 Male, age 74, both hemispheres 72.6
1940 Female, age 85, left hemisphere 38.4
Hippocampus, CA3
nTPM: 79.4
2861 Female, age 67, both hemispheres 142.9
2137 Male, age 80, left hemisphere 118.2
2436 Male, age 74, both hemispheres 63.6
1867 Male, age 76, both hemispheres 55.7
2620 Female, age 94, left hemisphere 49.3
1891 Female, age 85, both hemispheres 47.0
Parahippocampal cortex
nTPM: 55.1
2245 Female, age 91, both hemispheres 91.6
2018 Male, age 76, both hemispheres 66.8
2622 Female, age 67, right hemisphere 61.3
2250 Female, age 67, right hemisphere 58.0
2692 Male, age 74, both hemispheres 49.7
1850 Male, age 80, both hemispheres 47.1
2693 Female, age 94, both hemispheres 46.5
1990 Female, age 91, right hemisphere 43.6
2532 Female, age 72, left hemisphere 43.5
1933 Female, age 85, both hemispheres 42.9
Perirhinal gyrus
nTPM: 47.0
1847 Female, age 91, left hemisphere 62.3
2521 Female, age 94, right hemisphere 49.1
1794 Male, age 80, right hemisphere 46.7
1841 Female, age 85, right hemisphere 40.1
2848 Male, age 76, right hemisphere 36.8
Subiculum
nTPM: 54.6
2438 Female, age 94, left hemisphere 64.3
1901 Male, age 80, both hemispheres 59.0
2729 Female, age 91, right hemisphere 58.4
2042 Male, age 76, both hemispheres 56.5
2619 Male, age 74, both hemispheres 48.7
1977 Female, age 85, both hemispheres 40.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.5
Samples: 197

Max nTPM: 423.0
Min nTPM: 5.6
Std nTPM: 71.6
Median nTPM: 93.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 423.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 352.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 332.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 312.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 297.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 291.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 290.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 283.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 269.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 255.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 253.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.5
FF:10169-103B7 60 years, female 56.0
FF:10153-102I9 76 years, female 52.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.8
Pig sample Sample description nTPM
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 15.5
Min nTPM: 7.7
Sample A Female 15.5
Sample B Female 9.2
Sample C Male 12.3
Sample D Male 7.7
Dorsal hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 17.7
Min nTPM: 6.8
Sample A Female 11.3
Sample B Female 10.3
Sample C Male 17.7
Sample D Male 6.8
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 14.4
Min nTPM: 12.6
Sample A Female 12.6
Sample B Female 13.4
Sample C Male 14.4
Sample D Male 12.7
Ventral hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 19.9
Min nTPM: 9.4
Sample A Female 13.7
Sample B Female 9.4
Sample C Male 19.9
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 11.6
Sample A Male 12.4
Sample B Male 11.7
Sample C Female 12.0
Sample D Female 11.6
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.4
Sample A Male 8.7
Sample B Male 11.6
Sample C Female 8.4
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69860427 Antisense, RP_050331_03_G02, Mouse strain C57BL/6J (56 days, male) 0.4

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