HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:66.2 nTPM
HPA Brain:46.6 nTPM
GTEx:66.2 nTPM
FANTOM5:37.5 Scaled Tags Per Million
Pig:86.0 nTPM
Mouse:117.0 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.6
Sample id Sample description nTPM
Hippocampus
nTPM: 42.0
1898 Male, age 80, left hemisphere 49.5
2529 Female, age 94, left hemisphere 43.9
1855 Male, age 76, left hemisphere 43.2
2621 Female, age 67, right hemisphere 39.8
2148 Female, age 91, left hemisphere 38.1
1911 Female, age 85, right hemisphere 37.6
Dentate gyrus
nTPM: 41.9
2530 Female, age 94, left hemisphere 50.2
2528 Male, age 74, both hemispheres 48.3
2010 Male, age 76, both hemispheres 44.4
2246 Female, age 85, both hemispheres 38.7
1927 Female, age 91, both hemispheres 38.1
2531 Female, age 67, both hemispheres 31.7
Entorhinal gyrus
nTPM: 42.8
2117 Female, age 91, right hemisphere 52.2
2764 Male, age 80, right hemisphere 46.4
1787 Male, age 76, left hemisphere 46.1
2613 Female, age 94, left hemisphere 40.3
1938 Female, age 85, left hemisphere 39.6
2686 Male, age 75, right hemisphere 32.2
Hippocampus, CA1
nTPM: 42.3
2749 Male, age 80, left hemisphere 49.3
2527 Male, age 74, both hemispheres 45.8
2082 Female, age 91, right hemisphere 41.0
1873 Female, age 85, both hemispheres 39.3
2045 Male, age 76, both hemispheres 36.1
Hippocampus, CA2
nTPM: 46.6
2249 Male, age 74, both hemispheres 58.0
1963 Male, age 80, left hemisphere 49.0
2437 Female, age 94, left hemisphere 46.3
1892 Male, age 76, both hemispheres 45.3
1940 Female, age 85, left hemisphere 41.6
2113 Female, age 91, right hemisphere 39.8
Hippocampus, CA3
nTPM: 44.9
2436 Male, age 74, both hemispheres 75.0
1867 Male, age 76, both hemispheres 43.8
1891 Female, age 85, both hemispheres 40.8
2137 Male, age 80, left hemisphere 39.5
2861 Female, age 67, both hemispheres 36.6
2620 Female, age 94, left hemisphere 33.9
Parahippocampal cortex
nTPM: 38.4
2250 Female, age 67, right hemisphere 48.4
1850 Male, age 80, both hemispheres 43.4
2018 Male, age 76, both hemispheres 40.3
1990 Female, age 91, right hemisphere 39.9
2245 Female, age 91, both hemispheres 39.0
1933 Female, age 85, both hemispheres 38.4
2692 Male, age 74, both hemispheres 37.3
2693 Female, age 94, both hemispheres 33.6
2622 Female, age 67, right hemisphere 33.1
2532 Female, age 72, left hemisphere 31.0
Perirhinal gyrus
nTPM: 43.6
1794 Male, age 80, right hemisphere 50.2
1847 Female, age 91, left hemisphere 47.7
1841 Female, age 85, right hemisphere 44.1
2848 Male, age 76, right hemisphere 39.2
2521 Female, age 94, right hemisphere 36.6
Subiculum
nTPM: 42.9
1977 Female, age 85, both hemispheres 48.3
2619 Male, age 74, both hemispheres 46.1
2729 Female, age 91, right hemisphere 43.6
1901 Male, age 80, both hemispheres 42.7
2042 Male, age 76, both hemispheres 40.3
2438 Female, age 94, left hemisphere 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.2
Samples: 197

Max nTPM: 108.7
Min nTPM: 36.8
Std nTPM: 12.3
Median nTPM: 64.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 108.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 107.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 106.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 102.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 99.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 96.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 94.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 93.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 92.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 91.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 88.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.5
FF:10153-102I9 76 years, female 39.7
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.0
Pig sample Sample description nTPM
Subiculum
nTPM: 72.8
Samples: 4

Max nTPM: 95.9
Min nTPM: 62.0
Sample A Female 95.9
Sample B Female 66.5
Sample C Male 62.0
Sample D Male 66.6
Dorsal hippocampus
nTPM: 86.0
Samples: 4

Max nTPM: 118.5
Min nTPM: 60.5
Sample A Female 118.5
Sample B Female 84.6
Sample C Male 80.4
Sample D Male 60.5
Entorhinal cortex
nTPM: 73.1
Samples: 4

Max nTPM: 85.2
Min nTPM: 50.6
Sample A Female 72.0
Sample B Female 84.4
Sample C Male 85.2
Sample D Male 50.6
Ventral hippocampus
nTPM: 78.9
Samples: 4

Max nTPM: 93.5
Min nTPM: 59.3
Sample A Female 85.0
Sample B Female 59.3
Sample C Male 93.5
Sample D Male 77.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 117.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 103.6
Samples: 4

Max nTPM: 107.9
Min nTPM: 94.5
Sample A Male 94.5
Sample B Male 105.5
Sample C Female 106.6
Sample D Female 107.9
Hippocampal formation
nTPM: 117.0
Samples: 4

Max nTPM: 123.3
Min nTPM: 103.2
Sample A Male 123.3
Sample B Male 103.2
Sample C Female 120.2
Sample D Female 121.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
68546386 Antisense, RP_050120_02_D07, Mouse strain C57BL/6J (56 days, male) 1.8

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