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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
211.9
nTPM
FANTOM5:
311.5
Scaled Tags Per Million
Pig:
337.2
nTPM
Allen mouse:
13.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
211.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 97.8
1984
Male, age 76, both hemispheres
134.4
2301
Female, age 85, both hemispheres
100.3
2090
Male, age 80, both hemispheres
81.1
2188
Female, age 91, both hemispheres
75.5
Dorsal cochlear nucleus nTPM: 126.0
2370
Male, age 61, both hemispheres
153.3
2187
Female, age 91, both hemispheres
140.7
2058
Male, age 76, both hemispheres
139.8
2802
Male, age 74, right hemisphere
123.7
2378
Male, age 80, both hemispheres
72.5
Dorsal tegmental nucleus nTPM: 147.9
2083
Male, age 80, both hemispheres
183.0
1936
Male, age 76, left hemisphere
151.0
2358
Male, age 61, both hemispheres
141.4
2326
Male, age 74, both hemispheres
116.1
Dorsolateral tegmental area nTPM: 139.0
2141
Male, age 76, both hemispheres
175.9
2654
Male, age 80, both hemispheres
159.3
2751
Female, age 85, both hemispheres
154.9
2360
Male, age 74, both hemispheres
137.7
2337
Male, age 61, both hemispheres
67.1
Kolliker-Fuse nucleus nTPM: 138.6
2163
Male, age 80, both hemispheres
231.0
2793
Female, age 91, left hemisphere
102.8
2315
Male, age 76, right hemisphere
81.8
Lateral lemniscal nuclei nTPM: 163.4
2453
Male, age 74, right hemisphere
202.7
2169
Male, age 76, both hemispheres
186.8
2036
Male, age 80, both hemispheres
182.9
2746
Female, age 85, left hemisphere
145.4
2320
Female, age 91, left hemisphere
99.2
Lateral parabrachial nucleus nTPM: 134.2
2139
Female, age 85, right hemisphere
183.1
2790
Male, age 61, both hemispheres
179.8
2013
Male, age 80, both hemispheres
119.2
2792
Male, age 76, both hemispheres
54.6
Lateral vestibular nucleus nTPM: 183.4
2184
Male, age 76, both hemispheres
228.4
2311
Male, age 80, both hemispheres
138.3
Locus coeruleus nTPM: 211.9
2123
Female, age 91, both hemispheres
281.4
2720
Male, age 74, both hemispheres
218.7
2317
Female, age 72, unknown
208.8
2014
Male, age 55, unknown
200.1
2162
Male, age 80, both hemispheres
198.8
2788
Male, age 74, unknown
191.4
1980
Male, age 76, both hemispheres
184.2
Medial parabrachial nucleus nTPM: 166.3
2156
Male, age 61, both hemispheres
231.1
2170
Female, age 91, both hemispheres
177.6
2786
Male, age 76, both hemispheres
159.1
2854
Male, age 80, both hemispheres
135.5
2463
Female, age 85, right hemisphere
127.9
Medial periolivary nuclei nTPM: 145.6
2171
Female, age 85, both hemispheres
238.0
2063
Male, age 76, both hemispheres
190.3
2791
Male, age 74, right hemisphere
137.7
2458
Female, age 91, both hemispheres
86.6
2081
Male, age 80, both hemispheres
75.6
Motor facial nucleus nTPM: 156.5
2062
Male, age 76, both hemispheres
212.5
2365
Male, age 74, right hemisphere
175.7
2126
Male, age 61, both hemispheres
148.2
2327
Male, age 80, both hemispheres
143.5
2697
Female, age 85, both hemispheres
142.2
2795
Female, age 91, both hemispheres
116.7
Motor trigeminal nucleus nTPM: 150.8
2335
Male, age 61, both hemispheres
200.4
2309
Male, age 76, both hemispheres
164.9
2560
Male, age 74, both hemispheres
160.4
2079
Male, age 80, both hemispheres
136.0
2321
Female, age 91, both hemispheres
92.4
Nuclei of the trapezoid body nTPM: 173.9
2159
Male, age 61, both hemispheres
245.0
2735
Female, age 85, both hemispheres
219.8
1983
Male, age 76, both hemispheres
178.0
2166
Male, age 80, both hemispheres
126.6
2368
Female, age 91, both hemispheres
99.9
Nucleus raphe magnus nTPM: 188.9
2160
Male, age 61, both hemispheres
290.7
2172
Female, age 85, both hemispheres
251.1
2455
Male, age 74, both hemispheres
209.0
2328
Male, age 80, both hemispheres
142.5
2051
Male, age 76, both hemispheres
140.0
2459
Female, age 91, both hemispheres
100.3
Paramedian reticular nucleus nTPM: 206.2
2313
Male, age 61, both hemispheres
277.6
2050
Female, age 85, both hemispheres
238.6
2057
Male, age 80, both hemispheres
209.2
2052
Male, age 76, both hemispheres
99.5
Pedunculopontine tegmental nucleus nTPM: 162.5
1921
Female, age 85, both hemispheres
200.9
2334
Male, age 80, both hemispheres
167.1
2338
Male, age 61, both hemispheres
119.4
Pontine nuclei nTPM: 171.2
2787
Female, age 85, both hemispheres
286.8
2727
Male, age 61, right hemisphere
210.2
1863
Male, age 55, unknown
207.5
2109
Female, age 72, unknown
182.6
1968
Male, age 76, left hemisphere
173.5
2454
Male, age 74, left hemisphere
125.0
2115
Male, age 80, left hemisphere
105.4
2319
Female, age 91, both hemispheres
78.3
Pontine raphe nucleus nTPM: 200.6
2853
Male, age 76, midline
211.5
2122
Female, age 85, midline
189.7
Posteroventral cochlear nucleus nTPM: 116.6
2752
Female, age 85, both hemispheres
206.7
2070
Male, age 76, both hemispheres
154.7
2371
Male, age 61, both hemispheres
152.6
2341
Male, age 80, both hemispheres
39.9
2135
Female, age 91, both hemispheres
29.3
Principal sensory trigeminal nucleus nTPM: 170.3
2158
Male, age 61, both hemispheres
236.1
2324
Male, age 76, both hemispheres
201.1
2008
Male, age 80, left hemisphere
165.6
2367
Female, age 91, left hemisphere
78.4
Reticular pontine nucleus, caudal nTPM: 127.7
2332
Male, age 80, right hemisphere
165.4
2092
Male, age 76, both hemispheres
136.3
2559
Male, age 74, both hemispheres
118.0
2457
Female, age 91, both hemispheres
91.2
Reticular pontine nucleus, oral nTPM: 151.5
2012
Female, age 85, both hemispheres
169.8
2361
Male, age 74, both hemispheres
168.8
1939
Male, age 80, both hemispheres
168.0
2167
Male, age 76, both hemispheres
166.9
2366
Female, age 91, both hemispheres
83.9
Reticulotegmental nucleus nTPM: 156.6
2325
Male, age 76, both hemispheres
177.7
2452
Male, age 74, both hemispheres
168.0
2333
Male, age 80, both hemispheres
144.4
2322
Female, age 91, both hemispheres
136.2
Spinal trigeminal nucleus, oral nTPM: 194.4
2737
Female, age 85, both hemispheres
200.6
2164
Male, age 80, both hemispheres
192.1
1978
Male, age 76, both hemispheres
190.5
Subcoeruleus area nTPM: 175.1
2323
Female, age 91, left hemisphere
278.8
1958
Male, age 80, both hemispheres
183.9
2451
Male, age 74, both hemispheres
164.3
2089
Male, age 76, left hemisphere
136.4
2369
Female, age 85, left hemisphere
112.0
Superior olive nTPM: 137.9
1875
Female, age 85, both hemispheres
193.3
2364
Male, age 74, right hemisphere
136.4
2329
Male, age 80, right hemisphere
124.0
2020
Male, age 76, both hemispheres
123.2
2561
Female, age 91, both hemispheres
112.8
Ventral periolivary nuclei nTPM: 142.8
2165
Male, age 80, both hemispheres
178.7
2130
Female, age 85, both hemispheres
160.0
2794
Female, age 91, left hemisphere
122.9
2023
Male, age 76, both hemispheres
109.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 141.2
2449
Male, age 74, both hemispheres
199.9
2359
Male, age 61, both hemispheres
155.2
2840
Female, age 85, both hemispheres
150.4
1959
Male, age 76, both hemispheres
142.1
2161
Male, age 80, both hemispheres
122.0
2456
Female, age 91, both hemispheres
77.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
337.2
Pig sample
Sample description
nTPM
Pons nTPM: 337.2
Samples: 4
Max nTPM: 556.1
Min nTPM: 254.4
Sample A
Female
556.1
Sample B
Female
273.0
Sample C
Male
265.3
Sample D
Male
254.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
