HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:9.8 nTPM
HPA Brain:20.9 nTPM
GTEx:9.8 nTPM
FANTOM5:11.8 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:5.0 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007270
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.9
Sample id Sample description nTPM
Hippocampus
nTPM: 19.9
2529 Female, age 94, left hemisphere 24.1
1911 Female, age 85, right hemisphere 20.3
2621 Female, age 67, right hemisphere 20.3
1855 Male, age 76, left hemisphere 18.7
2148 Female, age 91, left hemisphere 18.7
1898 Male, age 80, left hemisphere 17.3
Dentate gyrus
nTPM: 19.5
2530 Female, age 94, left hemisphere 30.1
2531 Female, age 67, both hemispheres 22.5
1927 Female, age 91, both hemispheres 17.1
2528 Male, age 74, both hemispheres 16.3
2246 Female, age 85, both hemispheres 16.1
2010 Male, age 76, both hemispheres 14.5
Entorhinal gyrus
nTPM: 17.0
2686 Male, age 75, right hemisphere 20.5
2117 Female, age 91, right hemisphere 19.8
2764 Male, age 80, right hemisphere 18.5
2613 Female, age 94, left hemisphere 16.7
1787 Male, age 76, left hemisphere 14.0
1938 Female, age 85, left hemisphere 12.2
Hippocampus, CA1
nTPM: 15.4
2527 Male, age 74, both hemispheres 19.2
2082 Female, age 91, right hemisphere 17.3
1873 Female, age 85, both hemispheres 15.8
2045 Male, age 76, both hemispheres 14.3
2749 Male, age 80, left hemisphere 10.3
Hippocampus, CA2
nTPM: 19.5
2437 Female, age 94, left hemisphere 25.7
2249 Male, age 74, both hemispheres 19.8
2113 Female, age 91, right hemisphere 19.6
1963 Male, age 80, left hemisphere 19.0
1940 Female, age 85, left hemisphere 17.2
1892 Male, age 76, both hemispheres 15.7
Hippocampus, CA3
nTPM: 20.9
2861 Female, age 67, both hemispheres 31.4
1891 Female, age 85, both hemispheres 20.4
2436 Male, age 74, both hemispheres 20.4
2620 Female, age 94, left hemisphere 19.0
1867 Male, age 76, both hemispheres 18.1
2137 Male, age 80, left hemisphere 15.9
Parahippocampal cortex
nTPM: 16.8
2692 Male, age 74, both hemispheres 22.8
2622 Female, age 67, right hemisphere 20.4
2532 Female, age 72, left hemisphere 19.2
2018 Male, age 76, both hemispheres 16.8
1933 Female, age 85, both hemispheres 15.4
1990 Female, age 91, right hemisphere 15.4
2245 Female, age 91, both hemispheres 14.8
1850 Male, age 80, both hemispheres 14.7
2693 Female, age 94, both hemispheres 14.7
2250 Female, age 67, right hemisphere 13.6
Perirhinal gyrus
nTPM: 15.0
2521 Female, age 94, right hemisphere 16.3
1794 Male, age 80, right hemisphere 15.9
1841 Female, age 85, right hemisphere 15.1
1847 Female, age 91, left hemisphere 14.3
2848 Male, age 76, right hemisphere 13.3
Subiculum
nTPM: 18.5
2729 Female, age 91, right hemisphere 21.5
2619 Male, age 74, both hemispheres 19.8
2042 Male, age 76, both hemispheres 19.3
2438 Female, age 94, left hemisphere 18.6
1901 Male, age 80, both hemispheres 16.1
1977 Female, age 85, both hemispheres 16.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.8
Samples: 197

Max nTPM: 29.6
Min nTPM: 1.6
Std nTPM: 5.2
Median nTPM: 9.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 29.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 27.8
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 27.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 27.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 27.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 26.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 24.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 19.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 19.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 19.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 18.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.8
FF:10153-102I9 76 years, female 14.4
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.4
Pig sample Sample description nTPM
Subiculum
nTPM: 10.1
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.4
Sample A Female 10.9
Sample B Female 10.0
Sample C Male 9.4
Sample D Male 10.1
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.6
Sample A Female 8.9
Sample B Female 8.6
Sample C Male 9.9
Sample D Male 8.8
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.3
Sample A Female 10.8
Sample B Female 10.9
Sample C Male 10.3
Sample D Male 9.3
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.4
Sample A Female 9.5
Sample B Female 9.4
Sample C Male 12.6
Sample D Male 9.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.8
Sample A Male 5.0
Sample B Male 3.8
Sample C Female 5.9
Sample D Female 5.4
Hippocampal formation
nTPM: 4.7
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.0
Sample A Male 4.1
Sample B Male 4.5
Sample C Female 4.0
Sample D Female 6.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
513247 Antisense, RP_040810_01_E03, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org