HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:69.1 nTPM
HPA Brain:96.8 nTPM
GTEx:69.1 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:168.7 nTPM
Mouse:320.5 nTPM
Allen mouse:23.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.8
Sample id Sample description nTPM
Hippocampus
nTPM: 79.5
1898 Male, age 80, left hemisphere 107.1
2148 Female, age 91, left hemisphere 96.3
2621 Female, age 67, right hemisphere 94.1
1855 Male, age 76, left hemisphere 71.4
2529 Female, age 94, left hemisphere 56.8
1911 Female, age 85, right hemisphere 51.4
Dentate gyrus
nTPM: 96.8
2530 Female, age 94, left hemisphere 160.0
1927 Female, age 91, both hemispheres 119.6
2531 Female, age 67, both hemispheres 86.0
2010 Male, age 76, both hemispheres 84.9
2528 Male, age 74, both hemispheres 67.7
2246 Female, age 85, both hemispheres 62.5
Entorhinal gyrus
nTPM: 52.0
2764 Male, age 80, right hemisphere 58.6
2117 Female, age 91, right hemisphere 56.2
1787 Male, age 76, left hemisphere 55.0
2686 Male, age 75, right hemisphere 52.4
1938 Female, age 85, left hemisphere 45.7
2613 Female, age 94, left hemisphere 43.8
Hippocampus, CA1
nTPM: 76.8
2749 Male, age 80, left hemisphere 124.0
1873 Female, age 85, both hemispheres 79.1
2045 Male, age 76, both hemispheres 70.8
2082 Female, age 91, right hemisphere 59.4
2527 Male, age 74, both hemispheres 50.9
Hippocampus, CA2
nTPM: 84.7
2437 Female, age 94, left hemisphere 152.1
1892 Male, age 76, both hemispheres 120.8
1963 Male, age 80, left hemisphere 75.2
1940 Female, age 85, left hemisphere 69.9
2113 Female, age 91, right hemisphere 47.4
2249 Male, age 74, both hemispheres 42.6
Hippocampus, CA3
nTPM: 93.7
2620 Female, age 94, left hemisphere 132.9
2861 Female, age 67, both hemispheres 122.3
1867 Male, age 76, both hemispheres 117.7
2137 Male, age 80, left hemisphere 90.4
1891 Female, age 85, both hemispheres 60.3
2436 Male, age 74, both hemispheres 38.4
Parahippocampal cortex
nTPM: 61.5
2622 Female, age 67, right hemisphere 83.4
2693 Female, age 94, both hemispheres 72.6
1990 Female, age 91, right hemisphere 69.8
2245 Female, age 91, both hemispheres 69.0
2250 Female, age 67, right hemisphere 62.6
2532 Female, age 72, left hemisphere 59.6
2018 Male, age 76, both hemispheres 58.0
2692 Male, age 74, both hemispheres 52.2
1850 Male, age 80, both hemispheres 45.6
1933 Female, age 85, both hemispheres 42.0
Perirhinal gyrus
nTPM: 55.1
1794 Male, age 80, right hemisphere 68.2
2521 Female, age 94, right hemisphere 65.5
1841 Female, age 85, right hemisphere 53.7
1847 Female, age 91, left hemisphere 48.8
2848 Male, age 76, right hemisphere 39.2
Subiculum
nTPM: 75.1
2438 Female, age 94, left hemisphere 95.9
1901 Male, age 80, both hemispheres 87.2
2619 Male, age 74, both hemispheres 75.0
1977 Female, age 85, both hemispheres 67.9
2042 Male, age 76, both hemispheres 62.6
2729 Female, age 91, right hemisphere 62.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.1
Samples: 197

Max nTPM: 266.5
Min nTPM: 16.4
Std nTPM: 42.2
Median nTPM: 59.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 266.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 228.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 205.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 204.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 202.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 195.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 191.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 187.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 176.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 154.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 153.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10169-103B7 60 years, female 43.6
FF:10153-102I9 76 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 168.7
Pig sample Sample description nTPM
Subiculum
nTPM: 46.9
Samples: 4

Max nTPM: 78.5
Min nTPM: 32.3
Sample A Female 78.5
Sample B Female 32.3
Sample C Male 42.8
Sample D Male 33.8
Dorsal hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 85.8
Min nTPM: 39.0
Sample A Female 51.8
Sample B Female 39.0
Sample C Male 85.8
Sample D Male 43.2
Entorhinal cortex
nTPM: 168.7
Samples: 4

Max nTPM: 254.9
Min nTPM: 95.3
Sample A Female 170.6
Sample B Female 254.9
Sample C Male 95.3
Sample D Male 154.1
Ventral hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 65.0
Min nTPM: 27.5
Sample A Female 58.8
Sample B Female 27.5
Sample C Male 65.0
Sample D Male 38.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 320.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 288.2
Samples: 4

Max nTPM: 332.0
Min nTPM: 245.1
Sample A Male 332.0
Sample B Male 313.0
Sample C Female 262.8
Sample D Female 245.1
Hippocampal formation
nTPM: 320.5
Samples: 4

Max nTPM: 351.6
Min nTPM: 278.5
Sample A Male 278.5
Sample B Male 334.5
Sample C Female 351.6
Sample D Female 317.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.8
77454673 Antisense, RP_070129_01_C06, Mouse strain C57BL/6J (56 days, male) 23.8

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