HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:11.4 nTPM
HPA Brain:64.3 nTPM
GTEx:11.4 nTPM
FANTOM5:87.7 Scaled Tags Per Million
Pig:47.5 nTPM
Mouse:19.3 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027797
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.3
Sample id Sample description nTPM
Hippocampus
nTPM: 64.3
1898 Male, age 80, left hemisphere 74.8
2148 Female, age 91, left hemisphere 67.1
1911 Female, age 85, right hemisphere 65.3
2529 Female, age 94, left hemisphere 65.1
1855 Male, age 76, left hemisphere 64.2
2621 Female, age 67, right hemisphere 49.0
Dentate gyrus
nTPM: 57.2
2528 Male, age 74, both hemispheres 76.1
2246 Female, age 85, both hemispheres 61.2
2010 Male, age 76, both hemispheres 58.2
2530 Female, age 94, left hemisphere 56.0
1927 Female, age 91, both hemispheres 49.4
2531 Female, age 67, both hemispheres 42.6
Entorhinal gyrus
nTPM: 46.5
2117 Female, age 91, right hemisphere 67.7
1938 Female, age 85, left hemisphere 51.2
2764 Male, age 80, right hemisphere 43.5
2686 Male, age 75, right hemisphere 40.4
1787 Male, age 76, left hemisphere 39.3
2613 Female, age 94, left hemisphere 36.7
Hippocampus, CA1
nTPM: 53.1
1873 Female, age 85, both hemispheres 65.3
2082 Female, age 91, right hemisphere 65.3
2527 Male, age 74, both hemispheres 63.4
2045 Male, age 76, both hemispheres 40.5
2749 Male, age 80, left hemisphere 31.2
Hippocampus, CA2
nTPM: 55.4
2249 Male, age 74, both hemispheres 78.0
1940 Female, age 85, left hemisphere 68.2
2113 Female, age 91, right hemisphere 58.6
1963 Male, age 80, left hemisphere 52.2
2437 Female, age 94, left hemisphere 45.6
1892 Male, age 76, both hemispheres 29.8
Hippocampus, CA3
nTPM: 49.1
1891 Female, age 85, both hemispheres 64.0
2436 Male, age 74, both hemispheres 63.8
2620 Female, age 94, left hemisphere 58.7
2861 Female, age 67, both hemispheres 45.3
2137 Male, age 80, left hemisphere 32.2
1867 Male, age 76, both hemispheres 30.5
Parahippocampal cortex
nTPM: 46.6
2692 Male, age 74, both hemispheres 56.3
1850 Male, age 80, both hemispheres 55.8
1933 Female, age 85, both hemispheres 50.4
2250 Female, age 67, right hemisphere 50.1
1990 Female, age 91, right hemisphere 47.0
2245 Female, age 91, both hemispheres 44.7
2532 Female, age 72, left hemisphere 42.8
2622 Female, age 67, right hemisphere 42.7
2693 Female, age 94, both hemispheres 40.9
2018 Male, age 76, both hemispheres 35.6
Perirhinal gyrus
nTPM: 45.5
1794 Male, age 80, right hemisphere 49.6
2521 Female, age 94, right hemisphere 49.6
1841 Female, age 85, right hemisphere 47.7
1847 Female, age 91, left hemisphere 45.4
2848 Male, age 76, right hemisphere 35.3
Subiculum
nTPM: 56.4
2729 Female, age 91, right hemisphere 73.5
2042 Male, age 76, both hemispheres 56.5
2619 Male, age 74, both hemispheres 56.1
1901 Male, age 80, both hemispheres 53.7
1977 Female, age 85, both hemispheres 50.8
2438 Female, age 94, left hemisphere 48.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.4
Samples: 197

Max nTPM: 34.3
Min nTPM: 2.6
Std nTPM: 5.7
Median nTPM: 10.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 34.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 33.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 31.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 29.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 26.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 25.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 23.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 22.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 21.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.7
FF:10153-102I9 76 years, female 112.2
FF:10169-103B7 60 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.5
Pig sample Sample description nTPM
Subiculum
nTPM: 33.9
Samples: 4

Max nTPM: 36.1
Min nTPM: 32.5
Sample A Female 36.1
Sample B Female 32.5
Sample C Male 32.7
Sample D Male 34.3
Dorsal hippocampus
nTPM: 47.5
Samples: 4

Max nTPM: 54.3
Min nTPM: 39.4
Sample A Female 51.7
Sample B Female 44.5
Sample C Male 54.3
Sample D Male 39.4
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 31.0
Min nTPM: 24.9
Sample A Female 31.0
Sample B Female 30.5
Sample C Male 30.2
Sample D Male 24.9
Ventral hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 50.6
Min nTPM: 31.5
Sample A Female 43.8
Sample B Female 39.4
Sample C Male 31.5
Sample D Male 50.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 23.1
Min nTPM: 17.8
Sample A Male 23.1
Sample B Male 18.4
Sample C Female 18.0
Sample D Female 17.8
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 18.3
Min nTPM: 17.7
Sample A Male 18.1
Sample B Male 17.7
Sample C Female 18.3
Sample D Female 17.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70278105 Antisense, RP_050531_02_D12, Mouse strain C57BL/6J (56 days, male) 0.7
73931631 Antisense, RP_051214_04_A11, Mouse strain C57BL/6J (56 days, male) 0.5

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