HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:5.0 nTPM
HPA Brain:93.0 nTPM
GTEx:5.0 nTPM
FANTOM5:28.7 Scaled Tags Per Million
Pig:39.6 nTPM
Mouse:44.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019085Antibody HPA020456
Glial cells Not detectedNot detected
Neuronal cells LowMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.0
Sample id Sample description nTPM
Hippocampus
nTPM: 93.0
2621 Female, age 67, right hemisphere 103.5
2529 Female, age 94, left hemisphere 100.4
1911 Female, age 85, right hemisphere 97.8
1898 Male, age 80, left hemisphere 94.0
2148 Female, age 91, left hemisphere 85.3
1855 Male, age 76, left hemisphere 77.0
Dentate gyrus
nTPM: 81.9
2530 Female, age 94, left hemisphere 103.9
1927 Female, age 91, both hemispheres 88.3
2528 Male, age 74, both hemispheres 84.8
2246 Female, age 85, both hemispheres 77.3
2010 Male, age 76, both hemispheres 73.3
2531 Female, age 67, both hemispheres 63.9
Entorhinal gyrus
nTPM: 59.9
1938 Female, age 85, left hemisphere 74.8
1787 Male, age 76, left hemisphere 62.5
2117 Female, age 91, right hemisphere 60.5
2613 Female, age 94, left hemisphere 55.5
2764 Male, age 80, right hemisphere 53.5
2686 Male, age 75, right hemisphere 52.9
Hippocampus, CA1
nTPM: 86.2
1873 Female, age 85, both hemispheres 101.4
2527 Male, age 74, both hemispheres 98.3
2749 Male, age 80, left hemisphere 93.2
2045 Male, age 76, both hemispheres 69.4
2082 Female, age 91, right hemisphere 68.5
Hippocampus, CA2
nTPM: 82.8
1963 Male, age 80, left hemisphere 111.3
2249 Male, age 74, both hemispheres 92.2
1892 Male, age 76, both hemispheres 87.6
2437 Female, age 94, left hemisphere 82.2
2113 Female, age 91, right hemisphere 78.5
1940 Female, age 85, left hemisphere 45.2
Hippocampus, CA3
nTPM: 83.8
2137 Male, age 80, left hemisphere 104.9
1891 Female, age 85, both hemispheres 90.0
1867 Male, age 76, both hemispheres 87.8
2620 Female, age 94, left hemisphere 78.8
2861 Female, age 67, both hemispheres 75.8
2436 Male, age 74, both hemispheres 65.6
Parahippocampal cortex
nTPM: 65.8
2250 Female, age 67, right hemisphere 95.4
2018 Male, age 76, both hemispheres 88.4
2245 Female, age 91, both hemispheres 74.0
1933 Female, age 85, both hemispheres 70.1
1850 Male, age 80, both hemispheres 68.3
1990 Female, age 91, right hemisphere 66.2
2693 Female, age 94, both hemispheres 61.0
2692 Male, age 74, both hemispheres 47.0
2622 Female, age 67, right hemisphere 45.7
2532 Female, age 72, left hemisphere 41.7
Perirhinal gyrus
nTPM: 71.1
1847 Female, age 91, left hemisphere 82.1
1841 Female, age 85, right hemisphere 77.4
2848 Male, age 76, right hemisphere 71.4
1794 Male, age 80, right hemisphere 63.2
2521 Female, age 94, right hemisphere 61.3
Subiculum
nTPM: 70.6
2729 Female, age 91, right hemisphere 80.4
2438 Female, age 94, left hemisphere 76.9
1901 Male, age 80, both hemispheres 73.4
2042 Male, age 76, both hemispheres 69.2
1977 Female, age 85, both hemispheres 68.7
2619 Male, age 74, both hemispheres 55.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.0
Samples: 197

Max nTPM: 72.4
Min nTPM: 1.0
Std nTPM: 7.0
Median nTPM: 3.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 72.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 52.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 31.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 27.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 26.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 24.7
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 23.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 8.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 8.2
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 8.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 7.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.7
FF:10153-102I9 76 years, female 29.5
FF:10169-103B7 60 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.6
Pig sample Sample description nTPM
Subiculum
nTPM: 39.6
Samples: 4

Max nTPM: 47.2
Min nTPM: 35.2
Sample A Female 47.2
Sample B Female 37.0
Sample C Male 39.1
Sample D Male 35.2
Dorsal hippocampus
nTPM: 37.4
Samples: 4

Max nTPM: 39.5
Min nTPM: 32.7
Sample A Female 39.5
Sample B Female 38.2
Sample C Male 39.0
Sample D Male 32.7
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 39.8
Min nTPM: 32.3
Sample A Female 36.1
Sample B Female 36.4
Sample C Male 39.8
Sample D Male 32.3
Ventral hippocampus
nTPM: 36.4
Samples: 4

Max nTPM: 50.2
Min nTPM: 29.4
Sample A Female 30.9
Sample B Female 35.2
Sample C Male 29.4
Sample D Male 50.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.0
Samples: 4

Max nTPM: 48.5
Min nTPM: 40.1
Sample A Male 40.3
Sample B Male 40.1
Sample C Female 47.1
Sample D Female 48.5
Hippocampal formation
nTPM: 34.3
Samples: 4

Max nTPM: 39.9
Min nTPM: 30.7
Sample A Male 39.9
Sample B Male 31.9
Sample C Female 30.7
Sample D Female 34.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71789837 Antisense, RP_050921_03_G03, Mouse strain C57BL/6J (56 days, male) 0.1

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