HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:74.2 nTPM
HPA Brain:34.7 nTPM
GTEx:74.2 nTPM
FANTOM5:113.0 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:24.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002866
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 34.7
1898 Male, age 80, left hemisphere 39.6
1855 Male, age 76, left hemisphere 36.6
1911 Female, age 85, right hemisphere 34.6
2529 Female, age 94, left hemisphere 34.6
2148 Female, age 91, left hemisphere 33.3
2621 Female, age 67, right hemisphere 29.1
Dentate gyrus
nTPM: 31.2
2010 Male, age 76, both hemispheres 41.1
1927 Female, age 91, both hemispheres 33.8
2530 Female, age 94, left hemisphere 31.4
2246 Female, age 85, both hemispheres 29.2
2531 Female, age 67, both hemispheres 28.3
2528 Male, age 74, both hemispheres 23.1
Entorhinal gyrus
nTPM: 30.0
1938 Female, age 85, left hemisphere 33.6
1787 Male, age 76, left hemisphere 33.3
2686 Male, age 75, right hemisphere 31.8
2117 Female, age 91, right hemisphere 31.7
2764 Male, age 80, right hemisphere 25.5
2613 Female, age 94, left hemisphere 24.2
Hippocampus, CA1
nTPM: 29.7
1873 Female, age 85, both hemispheres 33.6
2045 Male, age 76, both hemispheres 31.4
2749 Male, age 80, left hemisphere 31.0
2527 Male, age 74, both hemispheres 29.1
2082 Female, age 91, right hemisphere 23.5
Hippocampus, CA2
nTPM: 32.3
1892 Male, age 76, both hemispheres 54.6
1940 Female, age 85, left hemisphere 31.5
2437 Female, age 94, left hemisphere 29.6
1963 Male, age 80, left hemisphere 27.3
2249 Male, age 74, both hemispheres 27.3
2113 Female, age 91, right hemisphere 23.5
Hippocampus, CA3
nTPM: 31.5
1867 Male, age 76, both hemispheres 43.8
1891 Female, age 85, both hemispheres 34.3
2137 Male, age 80, left hemisphere 33.0
2436 Male, age 74, both hemispheres 30.4
2861 Female, age 67, both hemispheres 25.6
2620 Female, age 94, left hemisphere 21.7
Parahippocampal cortex
nTPM: 30.6
1850 Male, age 80, both hemispheres 39.3
2250 Female, age 67, right hemisphere 34.6
2532 Female, age 72, left hemisphere 33.4
2245 Female, age 91, both hemispheres 31.9
1933 Female, age 85, both hemispheres 31.5
2693 Female, age 94, both hemispheres 31.4
2692 Male, age 74, both hemispheres 28.1
1990 Female, age 91, right hemisphere 27.2
2622 Female, age 67, right hemisphere 25.1
2018 Male, age 76, both hemispheres 24.0
Perirhinal gyrus
nTPM: 30.5
1841 Female, age 85, right hemisphere 35.3
1847 Female, age 91, left hemisphere 33.2
1794 Male, age 80, right hemisphere 32.4
2521 Female, age 94, right hemisphere 27.5
2848 Male, age 76, right hemisphere 24.1
Subiculum
nTPM: 32.9
2438 Female, age 94, left hemisphere 36.1
1901 Male, age 80, both hemispheres 36.0
1977 Female, age 85, both hemispheres 35.9
2619 Male, age 74, both hemispheres 32.3
2042 Male, age 76, both hemispheres 30.9
2729 Female, age 91, right hemisphere 26.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.2
Samples: 197

Max nTPM: 178.7
Min nTPM: 44.6
Std nTPM: 16.2
Median nTPM: 71.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 178.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 126.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 121.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 113.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 112.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 111.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 104.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 103.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 102.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 102.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 101.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.0
FF:10169-103B7 60 years, female 133.9
FF:10153-102I9 76 years, female 92.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.8
Pig sample Sample description nTPM
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 21.8
Min nTPM: 17.4
Sample A Female 21.8
Sample B Female 19.0
Sample C Male 17.4
Sample D Male 17.8
Dorsal hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 26.4
Min nTPM: 17.2
Sample A Female 26.4
Sample B Female 17.2
Sample C Male 21.8
Sample D Male 17.7
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 20.6
Min nTPM: 15.4
Sample A Female 18.5
Sample B Female 20.6
Sample C Male 17.5
Sample D Male 15.4
Ventral hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 21.7
Min nTPM: 17.9
Sample A Female 21.7
Sample B Female 17.9
Sample C Male 18.5
Sample D Male 18.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 24.4
Min nTPM: 18.1
Sample A Male 23.8
Sample B Male 21.9
Sample C Female 24.4
Sample D Female 18.1
Hippocampal formation
nTPM: 24.9
Samples: 4

Max nTPM: 29.7
Min nTPM: 22.4
Sample A Male 29.7
Sample B Male 24.9
Sample C Female 22.4
Sample D Female 22.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68522423 Antisense, RP_050118_02_A06, Mouse strain C57BL/6J (56 days, male) 0.7
77910779 Antisense, RP_070208_04_G04, Mouse strain C57BL/6J (56 days, male) 0.0

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