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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
562.9
nTPM
FANTOM5:
918.4
Scaled Tags Per Million
Pig:
333.0
nTPM
Allen mouse:
0.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
562.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 345.6
1984
Male, age 76, both hemispheres
407.8
2090
Male, age 80, both hemispheres
334.1
2188
Female, age 91, both hemispheres
322.2
2301
Female, age 85, both hemispheres
318.5
Dorsal cochlear nucleus nTPM: 374.7
2370
Male, age 61, both hemispheres
439.2
2058
Male, age 76, both hemispheres
413.4
2187
Female, age 91, both hemispheres
380.2
2378
Male, age 80, both hemispheres
335.8
2802
Male, age 74, right hemisphere
305.0
Dorsal tegmental nucleus nTPM: 512.0
2358
Male, age 61, both hemispheres
783.9
2083
Male, age 80, both hemispheres
492.5
1936
Male, age 76, left hemisphere
439.1
2326
Male, age 74, both hemispheres
332.7
Dorsolateral tegmental area nTPM: 408.2
2337
Male, age 61, both hemispheres
579.6
2654
Male, age 80, both hemispheres
503.5
2360
Male, age 74, both hemispheres
371.1
2141
Male, age 76, both hemispheres
359.7
2751
Female, age 85, both hemispheres
227.3
Kolliker-Fuse nucleus nTPM: 515.0
2315
Male, age 76, right hemisphere
598.0
2163
Male, age 80, both hemispheres
597.7
2793
Female, age 91, left hemisphere
349.3
Lateral lemniscal nuclei nTPM: 308.7
2746
Female, age 85, left hemisphere
350.9
2036
Male, age 80, both hemispheres
335.1
2453
Male, age 74, right hemisphere
303.1
2169
Male, age 76, both hemispheres
286.7
2320
Female, age 91, left hemisphere
267.7
Lateral parabrachial nucleus nTPM: 394.0
2139
Female, age 85, right hemisphere
492.2
2792
Male, age 76, both hemispheres
385.0
2013
Male, age 80, both hemispheres
350.2
2790
Male, age 61, both hemispheres
348.6
Lateral vestibular nucleus nTPM: 513.9
2184
Male, age 76, both hemispheres
540.9
2311
Male, age 80, both hemispheres
486.9
Locus coeruleus nTPM: 562.9
2123
Female, age 91, both hemispheres
751.4
2014
Male, age 55, unknown
659.9
2317
Female, age 72, unknown
617.4
2720
Male, age 74, both hemispheres
602.1
1980
Male, age 76, both hemispheres
493.8
2162
Male, age 80, both hemispheres
437.3
2788
Male, age 74, unknown
378.1
Medial parabrachial nucleus nTPM: 474.1
2463
Female, age 85, right hemisphere
605.0
2156
Male, age 61, both hemispheres
551.4
2854
Male, age 80, both hemispheres
433.2
2170
Female, age 91, both hemispheres
394.5
2786
Male, age 76, both hemispheres
386.5
Medial periolivary nuclei nTPM: 327.2
2171
Female, age 85, both hemispheres
422.4
2791
Male, age 74, right hemisphere
360.7
2081
Male, age 80, both hemispheres
302.7
2458
Female, age 91, both hemispheres
302.7
2063
Male, age 76, both hemispheres
247.7
Motor facial nucleus nTPM: 344.2
2795
Female, age 91, both hemispheres
409.3
2697
Female, age 85, both hemispheres
357.0
2365
Male, age 74, right hemisphere
354.6
2126
Male, age 61, both hemispheres
323.9
2327
Male, age 80, both hemispheres
310.7
2062
Male, age 76, both hemispheres
309.8
Motor trigeminal nucleus nTPM: 353.4
2335
Male, age 61, both hemispheres
496.9
2079
Male, age 80, both hemispheres
344.0
2309
Male, age 76, both hemispheres
328.1
2321
Female, age 91, both hemispheres
304.5
2560
Male, age 74, both hemispheres
293.6
Nuclei of the trapezoid body nTPM: 331.0
2735
Female, age 85, both hemispheres
418.2
1983
Male, age 76, both hemispheres
356.4
2368
Female, age 91, both hemispheres
319.6
2166
Male, age 80, both hemispheres
309.7
2159
Male, age 61, both hemispheres
251.1
Nucleus raphe magnus nTPM: 357.1
2172
Female, age 85, both hemispheres
456.9
2455
Male, age 74, both hemispheres
429.9
2328
Male, age 80, both hemispheres
343.6
2051
Male, age 76, both hemispheres
339.2
2160
Male, age 61, both hemispheres
306.8
2459
Female, age 91, both hemispheres
266.3
Paramedian reticular nucleus nTPM: 347.1
2313
Male, age 61, both hemispheres
390.9
2057
Male, age 80, both hemispheres
390.5
2050
Female, age 85, both hemispheres
345.8
2052
Male, age 76, both hemispheres
261.3
Pedunculopontine tegmental nucleus nTPM: 410.3
2334
Male, age 80, both hemispheres
557.8
2338
Male, age 61, both hemispheres
407.7
1921
Female, age 85, both hemispheres
265.3
Pontine nuclei nTPM: 364.7
2787
Female, age 85, both hemispheres
590.9
1863
Male, age 55, unknown
570.6
2109
Female, age 72, unknown
482.9
2115
Male, age 80, left hemisphere
324.9
2319
Female, age 91, both hemispheres
266.6
1968
Male, age 76, left hemisphere
253.7
2727
Male, age 61, right hemisphere
225.6
2454
Male, age 74, left hemisphere
202.0
Pontine raphe nucleus nTPM: 354.8
2122
Female, age 85, midline
358.1
2853
Male, age 76, midline
351.6
Posteroventral cochlear nucleus nTPM: 324.0
2371
Male, age 61, both hemispheres
458.4
2752
Female, age 85, both hemispheres
338.2
2070
Male, age 76, both hemispheres
285.6
2341
Male, age 80, both hemispheres
281.6
2135
Female, age 91, both hemispheres
256.1
Principal sensory trigeminal nucleus nTPM: 376.8
2324
Male, age 76, both hemispheres
623.0
2008
Male, age 80, left hemisphere
319.5
2158
Male, age 61, both hemispheres
305.1
2367
Female, age 91, left hemisphere
259.5
Reticular pontine nucleus, caudal nTPM: 288.8
2332
Male, age 80, right hemisphere
354.4
2092
Male, age 76, both hemispheres
318.9
2457
Female, age 91, both hemispheres
261.6
2559
Male, age 74, both hemispheres
220.1
Reticular pontine nucleus, oral nTPM: 326.4
1939
Male, age 80, both hemispheres
470.3
2167
Male, age 76, both hemispheres
334.4
2012
Female, age 85, both hemispheres
316.4
2366
Female, age 91, both hemispheres
267.4
2361
Male, age 74, both hemispheres
243.6
Reticulotegmental nucleus nTPM: 377.4
2333
Male, age 80, both hemispheres
449.1
2322
Female, age 91, both hemispheres
406.3
2325
Male, age 76, both hemispheres
344.8
2452
Male, age 74, both hemispheres
309.5
Spinal trigeminal nucleus, oral nTPM: 412.3
2164
Male, age 80, both hemispheres
517.8
2737
Female, age 85, both hemispheres
389.0
1978
Male, age 76, both hemispheres
330.2
Subcoeruleus area nTPM: 346.4
2323
Female, age 91, left hemisphere
554.7
1958
Male, age 80, both hemispheres
406.6
2451
Male, age 74, both hemispheres
322.1
2089
Male, age 76, left hemisphere
246.6
2369
Female, age 85, left hemisphere
201.8
Superior olive nTPM: 324.9
2364
Male, age 74, right hemisphere
417.2
1875
Female, age 85, both hemispheres
333.8
2561
Female, age 91, both hemispheres
332.8
2329
Male, age 80, right hemisphere
317.4
2020
Male, age 76, both hemispheres
223.2
Ventral periolivary nuclei nTPM: 320.6
2130
Female, age 85, both hemispheres
427.8
2165
Male, age 80, both hemispheres
354.9
2794
Female, age 91, left hemisphere
295.9
2023
Male, age 76, both hemispheres
203.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 357.6
2840
Female, age 85, both hemispheres
448.4
2359
Male, age 61, both hemispheres
395.6
2161
Male, age 80, both hemispheres
376.6
2449
Male, age 74, both hemispheres
356.6
2456
Female, age 91, both hemispheres
296.2
1959
Male, age 76, both hemispheres
272.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
333.0
Pig sample
Sample description
nTPM
Pons nTPM: 333.0
Samples: 4
Max nTPM: 398.5
Min nTPM: 280.3
Sample A
Female
352.2
Sample B
Female
280.3
Sample C
Male
300.9
Sample D
Male
398.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
