HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:60.1 nTPM
HPA Brain:25.2 nTPM
GTEx:60.1 nTPM
FANTOM5:96.7 Scaled Tags Per Million
Pig:27.5 nTPM
Mouse:107.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028943
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.2
1898 Male, age 80, left hemisphere 24.8
2529 Female, age 94, left hemisphere 22.9
2148 Female, age 91, left hemisphere 20.7
2621 Female, age 67, right hemisphere 20.3
1855 Male, age 76, left hemisphere 17.3
1911 Female, age 85, right hemisphere 15.4
Dentate gyrus
nTPM: 19.8
2010 Male, age 76, both hemispheres 26.1
2530 Female, age 94, left hemisphere 20.7
1927 Female, age 91, both hemispheres 19.7
2246 Female, age 85, both hemispheres 19.1
2531 Female, age 67, both hemispheres 16.8
2528 Male, age 74, both hemispheres 16.1
Entorhinal gyrus
nTPM: 17.8
2117 Female, age 91, right hemisphere 23.5
2764 Male, age 80, right hemisphere 18.4
1787 Male, age 76, left hemisphere 18.0
1938 Female, age 85, left hemisphere 17.5
2686 Male, age 75, right hemisphere 16.2
2613 Female, age 94, left hemisphere 13.5
Hippocampus, CA1
nTPM: 25.2
2749 Male, age 80, left hemisphere 42.9
1873 Female, age 85, both hemispheres 24.7
2045 Male, age 76, both hemispheres 23.9
2527 Male, age 74, both hemispheres 20.1
2082 Female, age 91, right hemisphere 14.3
Hippocampus, CA2
nTPM: 21.3
1963 Male, age 80, left hemisphere 33.1
1892 Male, age 76, both hemispheres 25.6
2249 Male, age 74, both hemispheres 19.6
1940 Female, age 85, left hemisphere 17.1
2113 Female, age 91, right hemisphere 16.4
2437 Female, age 94, left hemisphere 15.7
Hippocampus, CA3
nTPM: 21.5
2137 Male, age 80, left hemisphere 34.2
1867 Male, age 76, both hemispheres 29.1
2861 Female, age 67, both hemispheres 18.5
2436 Male, age 74, both hemispheres 16.5
1891 Female, age 85, both hemispheres 16.1
2620 Female, age 94, left hemisphere 14.3
Parahippocampal cortex
nTPM: 16.0
1850 Male, age 80, both hemispheres 19.0
1990 Female, age 91, right hemisphere 18.3
2245 Female, age 91, both hemispheres 18.1
2018 Male, age 76, both hemispheres 16.9
1933 Female, age 85, both hemispheres 16.8
2532 Female, age 72, left hemisphere 15.7
2622 Female, age 67, right hemisphere 14.4
2250 Female, age 67, right hemisphere 14.1
2692 Male, age 74, both hemispheres 14.0
2693 Female, age 94, both hemispheres 12.7
Perirhinal gyrus
nTPM: 17.1
1794 Male, age 80, right hemisphere 21.5
1847 Female, age 91, left hemisphere 21.1
1841 Female, age 85, right hemisphere 16.6
2848 Male, age 76, right hemisphere 14.2
2521 Female, age 94, right hemisphere 12.4
Subiculum
nTPM: 18.6
1901 Male, age 80, both hemispheres 23.4
2042 Male, age 76, both hemispheres 21.3
1977 Female, age 85, both hemispheres 18.2
2619 Male, age 74, both hemispheres 16.8
2729 Female, age 91, right hemisphere 16.5
2438 Female, age 94, left hemisphere 15.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.1
Samples: 197

Max nTPM: 125.9
Min nTPM: 35.2
Std nTPM: 14.2
Median nTPM: 57.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 125.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 108.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 107.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 100.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 98.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 98.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 98.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 95.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 90.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 88.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 87.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 96.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.7
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 64.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.5
Pig sample Sample description nTPM
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 27.3
Min nTPM: 19.3
Sample A Female 27.3
Sample B Female 21.9
Sample C Male 19.3
Sample D Male 20.7
Dorsal hippocampus
nTPM: 27.5
Samples: 4

Max nTPM: 35.3
Min nTPM: 22.8
Sample A Female 35.3
Sample B Female 26.9
Sample C Male 24.9
Sample D Male 22.8
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 28.0
Min nTPM: 18.5
Sample A Female 22.2
Sample B Female 28.0
Sample C Male 23.8
Sample D Male 18.5
Ventral hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 28.4
Min nTPM: 19.4
Sample A Female 25.7
Sample B Female 19.4
Sample C Male 24.8
Sample D Male 28.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.5
Samples: 4

Max nTPM: 113.3
Min nTPM: 93.9
Sample A Male 96.5
Sample B Male 113.3
Sample C Female 106.3
Sample D Female 93.9
Hippocampal formation
nTPM: 107.9
Samples: 4

Max nTPM: 120.9
Min nTPM: 102.6
Sample A Male 120.9
Sample B Male 102.6
Sample C Female 103.9
Sample D Female 104.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70795817 Antisense, RP_050712_02_A06, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org