HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:72.3 nTPM
HPA Brain:48.8 nTPM
GTEx:72.3 nTPM
FANTOM5:11.6 Scaled Tags Per Million
Pig:133.2 nTPM
Mouse:42.1 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.0
1898 Male, age 80, left hemisphere 39.8
2621 Female, age 67, right hemisphere 37.5
2148 Female, age 91, left hemisphere 36.8
2529 Female, age 94, left hemisphere 36.2
1911 Female, age 85, right hemisphere 34.1
1855 Male, age 76, left hemisphere 31.6
Dentate gyrus
nTPM: 38.0
2010 Male, age 76, both hemispheres 52.6
2530 Female, age 94, left hemisphere 43.3
2531 Female, age 67, both hemispheres 36.7
2246 Female, age 85, both hemispheres 35.4
2528 Male, age 74, both hemispheres 33.6
1927 Female, age 91, both hemispheres 26.2
Entorhinal gyrus
nTPM: 39.1
1938 Female, age 85, left hemisphere 57.2
2613 Female, age 94, left hemisphere 44.8
2117 Female, age 91, right hemisphere 38.9
1787 Male, age 76, left hemisphere 37.3
2686 Male, age 75, right hemisphere 29.7
2764 Male, age 80, right hemisphere 26.7
Hippocampus, CA1
nTPM: 31.8
2082 Female, age 91, right hemisphere 50.2
1873 Female, age 85, both hemispheres 33.4
2527 Male, age 74, both hemispheres 33.2
2045 Male, age 76, both hemispheres 23.7
2749 Male, age 80, left hemisphere 18.3
Hippocampus, CA2
nTPM: 40.2
2249 Male, age 74, both hemispheres 72.5
1940 Female, age 85, left hemisphere 53.9
2113 Female, age 91, right hemisphere 37.7
2437 Female, age 94, left hemisphere 30.9
1963 Male, age 80, left hemisphere 24.4
1892 Male, age 76, both hemispheres 21.7
Hippocampus, CA3
nTPM: 48.8
2436 Male, age 74, both hemispheres 144.1
2861 Female, age 67, both hemispheres 44.4
1891 Female, age 85, both hemispheres 34.5
2620 Female, age 94, left hemisphere 33.6
1867 Male, age 76, both hemispheres 20.2
2137 Male, age 80, left hemisphere 16.0
Parahippocampal cortex
nTPM: 28.1
1990 Female, age 91, right hemisphere 39.0
2692 Male, age 74, both hemispheres 38.8
2250 Female, age 67, right hemisphere 31.1
1933 Female, age 85, both hemispheres 29.6
2018 Male, age 76, both hemispheres 28.1
1850 Male, age 80, both hemispheres 26.8
2245 Female, age 91, both hemispheres 26.6
2622 Female, age 67, right hemisphere 24.0
2532 Female, age 72, left hemisphere 20.8
2693 Female, age 94, both hemispheres 16.4
Perirhinal gyrus
nTPM: 22.5
1847 Female, age 91, left hemisphere 37.7
1794 Male, age 80, right hemisphere 22.5
1841 Female, age 85, right hemisphere 19.9
2521 Female, age 94, right hemisphere 19.3
2848 Male, age 76, right hemisphere 13.0
Subiculum
nTPM: 35.9
1977 Female, age 85, both hemispheres 43.1
2619 Male, age 74, both hemispheres 40.0
2042 Male, age 76, both hemispheres 37.1
2729 Female, age 91, right hemisphere 34.3
2438 Female, age 94, left hemisphere 31.0
1901 Male, age 80, both hemispheres 30.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.3
Samples: 197

Max nTPM: 159.2
Min nTPM: 24.6
Std nTPM: 26.5
Median nTPM: 69.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 159.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 142.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 139.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 131.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 130.3
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 125.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 120.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 119.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 119.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 118.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 117.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.6
FF:10153-102I9 76 years, female 18.1
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 133.2
Pig sample Sample description nTPM
Subiculum
nTPM: 120.0
Samples: 4

Max nTPM: 137.1
Min nTPM: 90.7
Sample A Female 137.1
Sample B Female 90.7
Sample C Male 121.8
Sample D Male 130.5
Dorsal hippocampus
nTPM: 117.0
Samples: 4

Max nTPM: 172.6
Min nTPM: 77.7
Sample A Female 136.8
Sample B Female 80.9
Sample C Male 172.6
Sample D Male 77.7
Entorhinal cortex
nTPM: 88.4
Samples: 4

Max nTPM: 121.3
Min nTPM: 46.6
Sample A Female 102.9
Sample B Female 82.6
Sample C Male 121.3
Sample D Male 46.6
Ventral hippocampus
nTPM: 133.3
Samples: 4

Max nTPM: 203.7
Min nTPM: 91.1
Sample A Female 144.6
Sample B Female 91.1
Sample C Male 203.7
Sample D Male 93.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 20.6
Min nTPM: 14.0
Sample A Male 14.0
Sample B Male 15.4
Sample C Female 20.6
Sample D Female 18.1
Hippocampal formation
nTPM: 42.1
Samples: 4

Max nTPM: 55.9
Min nTPM: 33.7
Sample A Male 36.5
Sample B Male 33.7
Sample C Female 42.1
Sample D Female 55.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
75077281 Antisense, RP_060412_02_E12, Mouse strain C57BL/6J (56 days, male) 1.6
68920749 Antisense, RP_050303_01_B06, Mouse strain C57BL/6J (56 days, male) 0.5

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