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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
179.9
nTPM
FANTOM5:
210.2
Scaled Tags Per Million
Pig:
81.9
nTPM
Allen mouse:
4.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
179.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 85.5
1984
Male, age 76, both hemispheres
113.2
2301
Female, age 85, both hemispheres
92.0
2188
Female, age 91, both hemispheres
71.2
2090
Male, age 80, both hemispheres
65.6
Dorsal cochlear nucleus nTPM: 97.7
2058
Male, age 76, both hemispheres
117.4
2370
Male, age 61, both hemispheres
111.5
2802
Male, age 74, right hemisphere
99.8
2378
Male, age 80, both hemispheres
84.2
2187
Female, age 91, both hemispheres
75.8
Dorsal tegmental nucleus nTPM: 99.5
2358
Male, age 61, both hemispheres
124.1
2083
Male, age 80, both hemispheres
106.5
1936
Male, age 76, left hemisphere
99.2
2326
Male, age 74, both hemispheres
68.0
Dorsolateral tegmental area nTPM: 78.6
2654
Male, age 80, both hemispheres
106.1
2141
Male, age 76, both hemispheres
90.0
2337
Male, age 61, both hemispheres
76.9
2751
Female, age 85, both hemispheres
65.6
2360
Male, age 74, both hemispheres
54.3
Kolliker-Fuse nucleus nTPM: 111.3
2163
Male, age 80, both hemispheres
153.4
2793
Female, age 91, left hemisphere
119.9
2315
Male, age 76, right hemisphere
60.6
Lateral lemniscal nuclei nTPM: 160.9
2453
Male, age 74, right hemisphere
201.6
2169
Male, age 76, both hemispheres
190.7
2036
Male, age 80, both hemispheres
154.4
2320
Female, age 91, left hemisphere
132.8
2746
Female, age 85, left hemisphere
125.1
Lateral parabrachial nucleus nTPM: 102.8
2139
Female, age 85, right hemisphere
154.0
2790
Male, age 61, both hemispheres
126.2
2013
Male, age 80, both hemispheres
89.5
2792
Male, age 76, both hemispheres
41.4
Lateral vestibular nucleus nTPM: 136.2
2184
Male, age 76, both hemispheres
178.4
2311
Male, age 80, both hemispheres
94.1
Locus coeruleus nTPM: 136.4
2123
Female, age 91, both hemispheres
173.3
2720
Male, age 74, both hemispheres
163.1
2162
Male, age 80, both hemispheres
143.7
1980
Male, age 76, both hemispheres
138.6
2317
Female, age 72, unknown
124.5
2014
Male, age 55, unknown
116.9
2788
Male, age 74, unknown
94.7
Medial parabrachial nucleus nTPM: 97.8
2156
Male, age 61, both hemispheres
143.7
2786
Male, age 76, both hemispheres
108.5
2854
Male, age 80, both hemispheres
107.8
2170
Female, age 91, both hemispheres
69.0
2463
Female, age 85, right hemisphere
59.9
Medial periolivary nuclei nTPM: 147.8
2171
Female, age 85, both hemispheres
205.3
2063
Male, age 76, both hemispheres
193.6
2791
Male, age 74, right hemisphere
126.6
2458
Female, age 91, both hemispheres
124.0
2081
Male, age 80, both hemispheres
89.3
Motor facial nucleus nTPM: 160.4
2062
Male, age 76, both hemispheres
210.5
2795
Female, age 91, both hemispheres
180.3
2327
Male, age 80, both hemispheres
173.7
2365
Male, age 74, right hemisphere
152.1
2697
Female, age 85, both hemispheres
138.2
2126
Male, age 61, both hemispheres
108.0
Motor trigeminal nucleus nTPM: 127.1
2560
Male, age 74, both hemispheres
166.3
2079
Male, age 80, both hemispheres
133.2
2335
Male, age 61, both hemispheres
123.6
2309
Male, age 76, both hemispheres
114.5
2321
Female, age 91, both hemispheres
98.1
Nuclei of the trapezoid body nTPM: 174.6
2159
Male, age 61, both hemispheres
199.1
2735
Female, age 85, both hemispheres
198.9
1983
Male, age 76, both hemispheres
181.7
2368
Female, age 91, both hemispheres
161.2
2166
Male, age 80, both hemispheres
132.3
Nucleus raphe magnus nTPM: 179.9
2172
Female, age 85, both hemispheres
226.1
2160
Male, age 61, both hemispheres
221.8
2455
Male, age 74, both hemispheres
187.9
2051
Male, age 76, both hemispheres
153.3
2328
Male, age 80, both hemispheres
149.7
2459
Female, age 91, both hemispheres
140.6
Paramedian reticular nucleus nTPM: 131.2
2313
Male, age 61, both hemispheres
163.5
2050
Female, age 85, both hemispheres
153.5
2057
Male, age 80, both hemispheres
131.8
2052
Male, age 76, both hemispheres
76.0
Pedunculopontine tegmental nucleus nTPM: 93.0
2334
Male, age 80, both hemispheres
111.8
1921
Female, age 85, both hemispheres
83.9
2338
Male, age 61, both hemispheres
83.3
Pontine nuclei nTPM: 149.6
2787
Female, age 85, both hemispheres
217.9
1968
Male, age 76, left hemisphere
184.4
2727
Male, age 61, right hemisphere
182.0
1863
Male, age 55, unknown
170.7
2109
Female, age 72, unknown
135.4
2115
Male, age 80, left hemisphere
116.1
2454
Male, age 74, left hemisphere
108.4
2319
Female, age 91, both hemispheres
81.7
Pontine raphe nucleus nTPM: 127.6
2122
Female, age 85, midline
151.3
2853
Male, age 76, midline
103.8
Posteroventral cochlear nucleus nTPM: 85.4
2752
Female, age 85, both hemispheres
136.5
2371
Male, age 61, both hemispheres
109.5
2070
Male, age 76, both hemispheres
105.8
2341
Male, age 80, both hemispheres
56.8
2135
Female, age 91, both hemispheres
18.1
Principal sensory trigeminal nucleus nTPM: 154.4
2158
Male, age 61, both hemispheres
206.5
2324
Male, age 76, both hemispheres
154.9
2008
Male, age 80, left hemisphere
148.0
2367
Female, age 91, left hemisphere
108.4
Reticular pontine nucleus, caudal nTPM: 131.3
2332
Male, age 80, right hemisphere
187.4
2092
Male, age 76, both hemispheres
135.8
2457
Female, age 91, both hemispheres
121.1
2559
Male, age 74, both hemispheres
80.8
Reticular pontine nucleus, oral nTPM: 101.8
2361
Male, age 74, both hemispheres
126.1
2012
Female, age 85, both hemispheres
117.9
2366
Female, age 91, both hemispheres
95.7
2167
Male, age 76, both hemispheres
88.5
1939
Male, age 80, both hemispheres
81.1
Reticulotegmental nucleus nTPM: 130.4
2325
Male, age 76, both hemispheres
141.4
2452
Male, age 74, both hemispheres
140.3
2333
Male, age 80, both hemispheres
127.3
2322
Female, age 91, both hemispheres
112.5
Spinal trigeminal nucleus, oral nTPM: 125.1
2164
Male, age 80, both hemispheres
149.8
2737
Female, age 85, both hemispheres
126.2
1978
Male, age 76, both hemispheres
99.5
Subcoeruleus area nTPM: 113.2
2089
Male, age 76, left hemisphere
149.0
2323
Female, age 91, left hemisphere
140.6
1958
Male, age 80, both hemispheres
121.3
2451
Male, age 74, both hemispheres
106.5
2369
Female, age 85, left hemisphere
48.6
Superior olive nTPM: 140.2
2561
Female, age 91, both hemispheres
165.9
1875
Female, age 85, both hemispheres
154.8
2329
Male, age 80, right hemisphere
140.9
2020
Male, age 76, both hemispheres
129.1
2364
Male, age 74, right hemisphere
110.1
Ventral periolivary nuclei nTPM: 160.6
2130
Female, age 85, both hemispheres
204.9
2794
Female, age 91, left hemisphere
165.4
2165
Male, age 80, both hemispheres
163.9
2023
Male, age 76, both hemispheres
108.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 133.1
2449
Male, age 74, both hemispheres
173.1
1959
Male, age 76, both hemispheres
140.0
2161
Male, age 80, both hemispheres
132.2
2840
Female, age 85, both hemispheres
123.1
2456
Female, age 91, both hemispheres
121.3
2359
Male, age 61, both hemispheres
108.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
81.9
Pig sample
Sample description
nTPM
Pons nTPM: 81.9
Samples: 4
Max nTPM: 118.6
Min nTPM: 66.3
Sample A
Female
68.6
Sample B
Female
66.3
Sample C
Male
74.1
Sample D
Male
118.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
