HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:87.0 nTPM
HPA Brain:329.3 nTPM
GTEx:87.0 nTPM
FANTOM5:152.7 Scaled Tags Per Million
Pig:119.6 nTPM
Mouse:49.2 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042886
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 329.3
Sample id Sample description nTPM
Hippocampus
nTPM: 249.7
1911 Female, age 85, right hemisphere 305.9
2529 Female, age 94, left hemisphere 284.6
2621 Female, age 67, right hemisphere 250.0
2148 Female, age 91, left hemisphere 227.3
1898 Male, age 80, left hemisphere 219.1
1855 Male, age 76, left hemisphere 211.5
Dentate gyrus
nTPM: 271.5
2530 Female, age 94, left hemisphere 416.4
2528 Male, age 74, both hemispheres 283.6
2010 Male, age 76, both hemispheres 265.4
2531 Female, age 67, both hemispheres 251.3
2246 Female, age 85, both hemispheres 232.9
1927 Female, age 91, both hemispheres 179.1
Entorhinal gyrus
nTPM: 280.0
2117 Female, age 91, right hemisphere 420.8
2764 Male, age 80, right hemisphere 354.6
2613 Female, age 94, left hemisphere 267.4
1787 Male, age 76, left hemisphere 220.5
1938 Female, age 85, left hemisphere 216.5
2686 Male, age 75, right hemisphere 200.0
Hippocampus, CA1
nTPM: 223.3
2082 Female, age 91, right hemisphere 260.7
1873 Female, age 85, both hemispheres 252.1
2527 Male, age 74, both hemispheres 229.9
2749 Male, age 80, left hemisphere 225.9
2045 Male, age 76, both hemispheres 148.1
Hippocampus, CA2
nTPM: 256.1
1963 Male, age 80, left hemisphere 316.3
2249 Male, age 74, both hemispheres 291.7
2113 Female, age 91, right hemisphere 272.9
2437 Female, age 94, left hemisphere 255.5
1940 Female, age 85, left hemisphere 232.4
1892 Male, age 76, both hemispheres 167.6
Hippocampus, CA3
nTPM: 214.7
1891 Female, age 85, both hemispheres 318.3
1867 Male, age 76, both hemispheres 211.2
2620 Female, age 94, left hemisphere 202.7
2137 Male, age 80, left hemisphere 201.9
2436 Male, age 74, both hemispheres 181.2
2861 Female, age 67, both hemispheres 172.9
Parahippocampal cortex
nTPM: 209.7
2532 Female, age 72, left hemisphere 287.2
1990 Female, age 91, right hemisphere 278.3
2692 Male, age 74, both hemispheres 267.4
2245 Female, age 91, both hemispheres 227.0
2018 Male, age 76, both hemispheres 212.5
1933 Female, age 85, both hemispheres 201.3
1850 Male, age 80, both hemispheres 200.8
2693 Female, age 94, both hemispheres 158.4
2250 Female, age 67, right hemisphere 141.7
2622 Female, age 67, right hemisphere 122.3
Perirhinal gyrus
nTPM: 168.8
2521 Female, age 94, right hemisphere 210.7
1794 Male, age 80, right hemisphere 185.2
2848 Male, age 76, right hemisphere 159.9
1847 Female, age 91, left hemisphere 150.3
1841 Female, age 85, right hemisphere 137.7
Subiculum
nTPM: 329.3
2042 Male, age 76, both hemispheres 477.1
1901 Male, age 80, both hemispheres 390.8
1977 Female, age 85, both hemispheres 324.0
2619 Male, age 74, both hemispheres 268.4
2438 Female, age 94, left hemisphere 267.9
2729 Female, age 91, right hemisphere 247.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.0
Samples: 197

Max nTPM: 309.0
Min nTPM: 8.4
Std nTPM: 54.2
Median nTPM: 69.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 309.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 269.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 255.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 235.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 224.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 212.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 212.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 209.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 203.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 201.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 198.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.7
FF:10153-102I9 76 years, female 177.7
FF:10169-103B7 60 years, female 127.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 119.6
Pig sample Sample description nTPM
Subiculum
nTPM: 73.6
Samples: 4

Max nTPM: 89.2
Min nTPM: 61.4
Sample A Female 89.2
Sample B Female 71.1
Sample C Male 72.8
Sample D Male 61.4
Dorsal hippocampus
nTPM: 119.6
Samples: 4

Max nTPM: 171.2
Min nTPM: 43.2
Sample A Female 171.2
Sample B Female 99.9
Sample C Male 164.1
Sample D Male 43.2
Entorhinal cortex
nTPM: 66.0
Samples: 4

Max nTPM: 67.3
Min nTPM: 63.8
Sample A Female 65.9
Sample B Female 66.9
Sample C Male 67.3
Sample D Male 63.8
Ventral hippocampus
nTPM: 102.6
Samples: 4

Max nTPM: 121.8
Min nTPM: 53.0
Sample A Female 116.0
Sample B Female 53.0
Sample C Male 121.8
Sample D Male 119.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.4
Samples: 4

Max nTPM: 47.6
Min nTPM: 38.8
Sample A Male 47.6
Sample B Male 39.5
Sample C Female 38.8
Sample D Female 47.5
Hippocampal formation
nTPM: 49.2
Samples: 4

Max nTPM: 67.4
Min nTPM: 30.6
Sample A Male 30.6
Sample B Male 50.2
Sample C Female 67.4
Sample D Female 48.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
69514530 Antisense, RP_050419_03_E11, Mouse strain C57BL/6J (56 days, male) 8.4

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