HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:133.1 nTPM
HPA Brain:75.0 nTPM
GTEx:133.1 nTPM
FANTOM5:80.5 Scaled Tags Per Million
Pig:109.6 nTPM
Mouse:28.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009163Antibody HPA009269
Glial cells MediumMedium
Neuronal cells LowLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.0
Sample id Sample description nTPM
Hippocampus
nTPM: 62.3
2529 Female, age 94, left hemisphere 77.0
1911 Female, age 85, right hemisphere 67.7
2621 Female, age 67, right hemisphere 64.6
1855 Male, age 76, left hemisphere 57.9
2148 Female, age 91, left hemisphere 54.3
1898 Male, age 80, left hemisphere 52.4
Dentate gyrus
nTPM: 67.8
2530 Female, age 94, left hemisphere 144.5
2010 Male, age 76, both hemispheres 64.7
2246 Female, age 85, both hemispheres 63.3
2531 Female, age 67, both hemispheres 51.2
2528 Male, age 74, both hemispheres 48.8
1927 Female, age 91, both hemispheres 34.5
Entorhinal gyrus
nTPM: 67.6
2117 Female, age 91, right hemisphere 100.7
2764 Male, age 80, right hemisphere 71.1
2686 Male, age 75, right hemisphere 65.7
1787 Male, age 76, left hemisphere 58.5
1938 Female, age 85, left hemisphere 58.0
2613 Female, age 94, left hemisphere 51.5
Hippocampus, CA1
nTPM: 51.3
1873 Female, age 85, both hemispheres 61.4
2527 Male, age 74, both hemispheres 59.4
2082 Female, age 91, right hemisphere 48.1
2749 Male, age 80, left hemisphere 45.3
2045 Male, age 76, both hemispheres 42.2
Hippocampus, CA2
nTPM: 54.7
2437 Female, age 94, left hemisphere 64.0
1940 Female, age 85, left hemisphere 60.7
1963 Male, age 80, left hemisphere 55.7
2249 Male, age 74, both hemispheres 54.6
2113 Female, age 91, right hemisphere 50.8
1892 Male, age 76, both hemispheres 42.5
Hippocampus, CA3
nTPM: 43.9
1891 Female, age 85, both hemispheres 66.3
2861 Female, age 67, both hemispheres 46.7
1867 Male, age 76, both hemispheres 45.5
2137 Male, age 80, left hemisphere 37.1
2620 Female, age 94, left hemisphere 34.9
2436 Male, age 74, both hemispheres 32.8
Parahippocampal cortex
nTPM: 54.0
2692 Male, age 74, both hemispheres 71.8
2532 Female, age 72, left hemisphere 70.8
2245 Female, age 91, both hemispheres 64.6
1933 Female, age 85, both hemispheres 55.8
2018 Male, age 76, both hemispheres 52.8
2622 Female, age 67, right hemisphere 52.2
1990 Female, age 91, right hemisphere 50.5
1850 Male, age 80, both hemispheres 47.1
2250 Female, age 67, right hemisphere 40.2
2693 Female, age 94, both hemispheres 34.5
Perirhinal gyrus
nTPM: 40.1
2848 Male, age 76, right hemisphere 47.7
1841 Female, age 85, right hemisphere 43.1
1794 Male, age 80, right hemisphere 42.7
1847 Female, age 91, left hemisphere 34.9
2521 Female, age 94, right hemisphere 32.2
Subiculum
nTPM: 75.0
2042 Male, age 76, both hemispheres 98.7
2438 Female, age 94, left hemisphere 86.3
1901 Male, age 80, both hemispheres 78.5
1977 Female, age 85, both hemispheres 68.7
2619 Male, age 74, both hemispheres 62.6
2729 Female, age 91, right hemisphere 55.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 133.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 133.1
Samples: 197

Max nTPM: 568.0
Min nTPM: 19.2
Std nTPM: 70.6
Median nTPM: 120.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 568.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 447.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 404.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 307.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 297.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 277.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 273.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 271.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 263.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 257.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 254.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.5
FF:10153-102I9 76 years, female 81.1
FF:10169-103B7 60 years, female 79.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 109.6
Pig sample Sample description nTPM
Subiculum
nTPM: 82.4
Samples: 4

Max nTPM: 103.9
Min nTPM: 65.0
Sample A Female 103.9
Sample B Female 79.1
Sample C Male 81.6
Sample D Male 65.0
Dorsal hippocampus
nTPM: 109.6
Samples: 4

Max nTPM: 139.1
Min nTPM: 82.5
Sample A Female 139.1
Sample B Female 113.1
Sample C Male 103.8
Sample D Male 82.5
Entorhinal cortex
nTPM: 91.2
Samples: 4

Max nTPM: 97.2
Min nTPM: 82.6
Sample A Female 88.7
Sample B Female 97.2
Sample C Male 96.1
Sample D Male 82.6
Ventral hippocampus
nTPM: 101.3
Samples: 4

Max nTPM: 131.2
Min nTPM: 70.0
Sample A Female 89.7
Sample B Female 70.0
Sample C Male 114.1
Sample D Male 131.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 27.1
Min nTPM: 20.5
Sample A Male 21.4
Sample B Male 20.5
Sample C Female 26.9
Sample D Female 27.1
Hippocampal formation
nTPM: 28.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 25.2
Sample A Male 29.6
Sample B Male 25.2
Sample C Female 31.7
Sample D Female 27.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69202358 Antisense, RP_050324_03_E03, Mouse strain C57BL/6J (56 days, male) 1.1
72340126 Antisense, RP_051101_02_A06, Mouse strain C57BL/6J (56 days, male) 0.2

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