HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:7.0 nTPM
HPA Brain:12.1 nTPM
GTEx:7.0 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Pig:15.3 nTPM
Mouse:2.9 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039618
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
1898 Male, age 80, left hemisphere 14.1
1855 Male, age 76, left hemisphere 11.7
2621 Female, age 67, right hemisphere 10.6
2148 Female, age 91, left hemisphere 10.1
1911 Female, age 85, right hemisphere 9.5
2529 Female, age 94, left hemisphere 9.4
Dentate gyrus
nTPM: 10.7
2010 Male, age 76, both hemispheres 12.9
1927 Female, age 91, both hemispheres 11.5
2530 Female, age 94, left hemisphere 10.4
2246 Female, age 85, both hemispheres 10.3
2528 Male, age 74, both hemispheres 10.2
2531 Female, age 67, both hemispheres 9.1
Entorhinal gyrus
nTPM: 9.6
2117 Female, age 91, right hemisphere 11.6
2686 Male, age 75, right hemisphere 9.5
1938 Female, age 85, left hemisphere 9.3
1787 Male, age 76, left hemisphere 9.1
2764 Male, age 80, right hemisphere 9.1
2613 Female, age 94, left hemisphere 8.7
Hippocampus, CA1
nTPM: 12.1
2749 Male, age 80, left hemisphere 18.0
2045 Male, age 76, both hemispheres 11.5
1873 Female, age 85, both hemispheres 11.0
2527 Male, age 74, both hemispheres 10.2
2082 Female, age 91, right hemisphere 10.0
Hippocampus, CA2
nTPM: 10.6
1963 Male, age 80, left hemisphere 12.0
1892 Male, age 76, both hemispheres 11.4
2249 Male, age 74, both hemispheres 10.9
2113 Female, age 91, right hemisphere 10.2
1940 Female, age 85, left hemisphere 9.9
2437 Female, age 94, left hemisphere 9.1
Hippocampus, CA3
nTPM: 11.4
2137 Male, age 80, left hemisphere 15.3
1867 Male, age 76, both hemispheres 12.2
1891 Female, age 85, both hemispheres 11.9
2620 Female, age 94, left hemisphere 10.9
2436 Male, age 74, both hemispheres 10.5
2861 Female, age 67, both hemispheres 7.6
Parahippocampal cortex
nTPM: 10.0
2018 Male, age 76, both hemispheres 11.8
1850 Male, age 80, both hemispheres 11.7
2245 Female, age 91, both hemispheres 10.1
2692 Male, age 74, both hemispheres 9.9
1933 Female, age 85, both hemispheres 9.8
2532 Female, age 72, left hemisphere 9.8
2250 Female, age 67, right hemisphere 9.7
1990 Female, age 91, right hemisphere 9.6
2693 Female, age 94, both hemispheres 9.1
2622 Female, age 67, right hemisphere 8.2
Perirhinal gyrus
nTPM: 10.7
1794 Male, age 80, right hemisphere 12.2
1841 Female, age 85, right hemisphere 11.7
1847 Female, age 91, left hemisphere 11.5
2521 Female, age 94, right hemisphere 9.2
2848 Male, age 76, right hemisphere 8.9
Subiculum
nTPM: 10.2
1977 Female, age 85, both hemispheres 12.7
1901 Male, age 80, both hemispheres 12.1
2042 Male, age 76, both hemispheres 10.6
2729 Female, age 91, right hemisphere 10.5
2619 Male, age 74, both hemispheres 8.8
2438 Female, age 94, left hemisphere 6.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.0
Samples: 197

Max nTPM: 13.8
Min nTPM: 4.7
Std nTPM: 1.1
Median nTPM: 6.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 13.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 11.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 11.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 10.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 9.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 9.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 9.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 9.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 9.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 8.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.0
FF:10169-103B7 60 years, female 61.2
FF:10153-102I9 76 years, female 30.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.3
Pig sample Sample description nTPM
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.8
Sample A Female 16.9
Sample B Female 13.4
Sample C Male 13.5
Sample D Male 11.8
Dorsal hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 18.9
Min nTPM: 13.1
Sample A Female 18.9
Sample B Female 14.4
Sample C Male 14.7
Sample D Male 13.1
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.7
Sample A Female 14.6
Sample B Female 14.4
Sample C Male 11.7
Sample D Male 12.1
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.4
Sample A Female 14.3
Sample B Female 11.4
Sample C Male 16.2
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.6
Sample A Male 2.6
Sample B Male 3.1
Sample C Female 2.7
Sample D Female 3.0
Hippocampal formation
nTPM: 2.8
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.6
Sample A Male 2.6
Sample B Male 3.0
Sample C Female 2.8
Sample D Female 2.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
75828168 Antisense, RP_060601_01_E04, Mouse strain C57BL/6J (56 days, male) 1.7

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