HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:36.8 nTPM
HPA Brain:68.1 nTPM
GTEx:36.8 nTPM
FANTOM5:54.1 Scaled Tags Per Million
Pig:27.5 nTPM
Mouse:102.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057150Antibody CAB015228
Glial cells Not detectedMedium
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.1
Sample id Sample description nTPM
Hippocampus
nTPM: 57.4
1855 Male, age 76, left hemisphere 69.8
1898 Male, age 80, left hemisphere 62.1
2621 Female, age 67, right hemisphere 58.9
2529 Female, age 94, left hemisphere 53.1
2148 Female, age 91, left hemisphere 50.6
1911 Female, age 85, right hemisphere 49.9
Dentate gyrus
nTPM: 59.3
2530 Female, age 94, left hemisphere 76.8
2010 Male, age 76, both hemispheres 75.4
2246 Female, age 85, both hemispheres 58.8
1927 Female, age 91, both hemispheres 52.0
2531 Female, age 67, both hemispheres 51.7
2528 Male, age 74, both hemispheres 41.2
Entorhinal gyrus
nTPM: 48.8
2764 Male, age 80, right hemisphere 60.4
1787 Male, age 76, left hemisphere 58.3
2613 Female, age 94, left hemisphere 50.2
1938 Female, age 85, left hemisphere 45.7
2117 Female, age 91, right hemisphere 44.0
2686 Male, age 75, right hemisphere 34.0
Hippocampus, CA1
nTPM: 68.1
2749 Male, age 80, left hemisphere 108.8
2045 Male, age 76, both hemispheres 89.1
1873 Female, age 85, both hemispheres 61.4
2527 Male, age 74, both hemispheres 50.0
2082 Female, age 91, right hemisphere 31.3
Hippocampus, CA2
nTPM: 56.5
1892 Male, age 76, both hemispheres 86.6
1963 Male, age 80, left hemisphere 66.9
2437 Female, age 94, left hemisphere 51.4
2249 Male, age 74, both hemispheres 48.7
1940 Female, age 85, left hemisphere 44.0
2113 Female, age 91, right hemisphere 41.3
Hippocampus, CA3
nTPM: 60.8
2620 Female, age 94, left hemisphere 82.7
1867 Male, age 76, both hemispheres 74.5
2137 Male, age 80, left hemisphere 73.9
2861 Female, age 67, both hemispheres 48.1
1891 Female, age 85, both hemispheres 43.2
2436 Male, age 74, both hemispheres 42.2
Parahippocampal cortex
nTPM: 46.1
2245 Female, age 91, both hemispheres 72.8
1933 Female, age 85, both hemispheres 50.9
2018 Male, age 76, both hemispheres 50.4
2250 Female, age 67, right hemisphere 49.1
2532 Female, age 72, left hemisphere 48.8
1850 Male, age 80, both hemispheres 45.8
1990 Female, age 91, right hemisphere 43.7
2692 Male, age 74, both hemispheres 34.7
2693 Female, age 94, both hemispheres 33.6
2622 Female, age 67, right hemisphere 31.6
Perirhinal gyrus
nTPM: 55.5
1794 Male, age 80, right hemisphere 67.5
1847 Female, age 91, left hemisphere 60.8
2521 Female, age 94, right hemisphere 54.9
2848 Male, age 76, right hemisphere 49.9
1841 Female, age 85, right hemisphere 44.5
Subiculum
nTPM: 48.3
1977 Female, age 85, both hemispheres 59.4
2042 Male, age 76, both hemispheres 58.4
1901 Male, age 80, both hemispheres 55.0
2619 Male, age 74, both hemispheres 40.9
2438 Female, age 94, left hemisphere 38.8
2729 Female, age 91, right hemisphere 37.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.8
Samples: 197

Max nTPM: 104.2
Min nTPM: 13.9
Std nTPM: 14.8
Median nTPM: 35.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 104.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 80.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 75.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 74.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 69.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 69.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 68.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 67.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 67.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 66.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 66.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.1
FF:10169-103B7 60 years, female 65.4
FF:10153-102I9 76 years, female 42.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.5
Pig sample Sample description nTPM
Subiculum
nTPM: 23.8
Samples: 4

Max nTPM: 33.0
Min nTPM: 20.4
Sample A Female 33.0
Sample B Female 20.9
Sample C Male 20.4
Sample D Male 21.0
Dorsal hippocampus
nTPM: 27.5
Samples: 4

Max nTPM: 39.0
Min nTPM: 19.5
Sample A Female 39.0
Sample B Female 27.7
Sample C Male 23.7
Sample D Male 19.5
Entorhinal cortex
nTPM: 26.5
Samples: 4

Max nTPM: 31.0
Min nTPM: 19.2
Sample A Female 28.2
Sample B Female 31.0
Sample C Male 27.5
Sample D Male 19.2
Ventral hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 29.7
Min nTPM: 18.3
Sample A Female 28.5
Sample B Female 18.3
Sample C Male 29.7
Sample D Male 22.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 102.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.7
Samples: 4

Max nTPM: 93.4
Min nTPM: 88.7
Sample A Male 91.3
Sample B Male 93.4
Sample C Female 88.7
Sample D Female 89.5
Hippocampal formation
nTPM: 102.5
Samples: 4

Max nTPM: 107.2
Min nTPM: 93.1
Sample A Male 106.5
Sample B Male 93.1
Sample C Female 103.1
Sample D Female 107.2

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