HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:9.4 nTPM
HPA Brain:62.8 nTPM
GTEx:9.4 nTPM
FANTOM5:79.9 Scaled Tags Per Million
Pig:31.8 nTPM
Mouse:27.5 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045144
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.8
Sample id Sample description nTPM
Hippocampus
nTPM: 56.1
2529 Female, age 94, left hemisphere 63.9
2148 Female, age 91, left hemisphere 62.0
1855 Male, age 76, left hemisphere 58.5
2621 Female, age 67, right hemisphere 55.9
1898 Male, age 80, left hemisphere 55.0
1911 Female, age 85, right hemisphere 41.4
Dentate gyrus
nTPM: 54.2
2531 Female, age 67, both hemispheres 68.4
2530 Female, age 94, left hemisphere 58.4
2528 Male, age 74, both hemispheres 57.6
2010 Male, age 76, both hemispheres 53.5
2246 Female, age 85, both hemispheres 47.4
1927 Female, age 91, both hemispheres 39.8
Entorhinal gyrus
nTPM: 62.8
2613 Female, age 94, left hemisphere 71.6
2686 Male, age 75, right hemisphere 67.1
2764 Male, age 80, right hemisphere 66.6
2117 Female, age 91, right hemisphere 62.7
1938 Female, age 85, left hemisphere 54.9
1787 Male, age 76, left hemisphere 53.7
Hippocampus, CA1
nTPM: 49.5
2045 Male, age 76, both hemispheres 55.8
2527 Male, age 74, both hemispheres 52.6
2082 Female, age 91, right hemisphere 47.8
2749 Male, age 80, left hemisphere 46.3
1873 Female, age 85, both hemispheres 44.9
Hippocampus, CA2
nTPM: 45.4
2437 Female, age 94, left hemisphere 57.7
2113 Female, age 91, right hemisphere 45.7
1963 Male, age 80, left hemisphere 44.7
1892 Male, age 76, both hemispheres 42.0
1940 Female, age 85, left hemisphere 41.6
2249 Male, age 74, both hemispheres 40.5
Hippocampus, CA3
nTPM: 57.8
2861 Female, age 67, both hemispheres 83.9
2620 Female, age 94, left hemisphere 78.3
2137 Male, age 80, left hemisphere 51.5
1867 Male, age 76, both hemispheres 49.9
1891 Female, age 85, both hemispheres 46.2
2436 Male, age 74, both hemispheres 37.1
Parahippocampal cortex
nTPM: 53.3
2532 Female, age 72, left hemisphere 63.6
2622 Female, age 67, right hemisphere 63.2
2692 Male, age 74, both hemispheres 59.2
1850 Male, age 80, both hemispheres 54.4
2245 Female, age 91, both hemispheres 53.0
2018 Male, age 76, both hemispheres 52.8
2693 Female, age 94, both hemispheres 50.9
1933 Female, age 85, both hemispheres 49.1
1990 Female, age 91, right hemisphere 46.5
2250 Female, age 67, right hemisphere 40.4
Perirhinal gyrus
nTPM: 50.9
1794 Male, age 80, right hemisphere 57.7
2848 Male, age 76, right hemisphere 53.6
2521 Female, age 94, right hemisphere 50.7
1847 Female, age 91, left hemisphere 47.7
1841 Female, age 85, right hemisphere 44.7
Subiculum
nTPM: 55.9
2438 Female, age 94, left hemisphere 58.4
2619 Male, age 74, both hemispheres 57.7
1901 Male, age 80, both hemispheres 57.3
2042 Male, age 76, both hemispheres 56.0
2729 Female, age 91, right hemisphere 56.0
1977 Female, age 85, both hemispheres 49.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.4
Samples: 197

Max nTPM: 20.6
Min nTPM: 1.9
Std nTPM: 3.9
Median nTPM: 8.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 20.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 19.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 19.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 17.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 17.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 17.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 17.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 17.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 16.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 16.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 16.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.9
FF:10153-102I9 76 years, female 96.6
FF:10169-103B7 60 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.8
Pig sample Sample description nTPM
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 37.4
Min nTPM: 26.3
Sample A Female 37.4
Sample B Female 27.6
Sample C Male 29.6
Sample D Male 26.3
Dorsal hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 32.2
Min nTPM: 28.6
Sample A Female 28.6
Sample B Female 32.2
Sample C Male 30.6
Sample D Male 29.2
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 34.3
Min nTPM: 26.4
Sample A Female 34.3
Sample B Female 26.4
Sample C Male 31.9
Sample D Male 34.0
Ventral hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 40.1
Min nTPM: 26.1
Sample A Female 27.6
Sample B Female 26.1
Sample C Male 40.1
Sample D Male 33.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.5
Samples: 4

Max nTPM: 31.5
Min nTPM: 24.8
Sample A Male 27.8
Sample B Male 24.8
Sample C Female 25.9
Sample D Female 31.5
Hippocampal formation
nTPM: 22.1
Samples: 4

Max nTPM: 24.8
Min nTPM: 18.3
Sample A Male 18.3
Sample B Male 24.8
Sample C Female 23.3
Sample D Female 21.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
70231779 Antisense, RP_050526_01_H08, Mouse strain C57BL/6J (56 days, male) 8.5
74988259 Antisense, RP_060315_05_C02, Mouse strain C57BL/6J (56 days, male) 7.8
74359598 Antisense, RP_051219_04_H10, Mouse strain C57BL/6J (56 days, male) 1.3

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