HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.7 nTPM
HPA Brain:42.7 nTPM
GTEx:14.7 nTPM
FANTOM5:31.0 Scaled Tags Per Million
Pig:32.7 nTPM
Mouse:39.9 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.7
Sample id Sample description nTPM
Hippocampus
nTPM: 38.7
1898 Male, age 80, left hemisphere 49.7
2148 Female, age 91, left hemisphere 39.9
2621 Female, age 67, right hemisphere 39.8
1855 Male, age 76, left hemisphere 34.6
1911 Female, age 85, right hemisphere 34.6
2529 Female, age 94, left hemisphere 33.4
Dentate gyrus
nTPM: 40.1
1927 Female, age 91, both hemispheres 46.2
2010 Male, age 76, both hemispheres 41.8
2528 Male, age 74, both hemispheres 40.4
2530 Female, age 94, left hemisphere 39.4
2246 Female, age 85, both hemispheres 36.4
2531 Female, age 67, both hemispheres 36.1
Entorhinal gyrus
nTPM: 37.6
2764 Male, age 80, right hemisphere 44.7
1938 Female, age 85, left hemisphere 38.5
1787 Male, age 76, left hemisphere 37.8
2613 Female, age 94, left hemisphere 37.7
2117 Female, age 91, right hemisphere 35.4
2686 Male, age 75, right hemisphere 31.7
Hippocampus, CA1
nTPM: 42.7
2749 Male, age 80, left hemisphere 63.4
1873 Female, age 85, both hemispheres 43.8
2527 Male, age 74, both hemispheres 41.8
2082 Female, age 91, right hemisphere 34.8
2045 Male, age 76, both hemispheres 29.6
Hippocampus, CA2
nTPM: 40.6
1963 Male, age 80, left hemisphere 51.2
1892 Male, age 76, both hemispheres 43.9
2249 Male, age 74, both hemispheres 40.0
2437 Female, age 94, left hemisphere 39.9
2113 Female, age 91, right hemisphere 36.9
1940 Female, age 85, left hemisphere 31.5
Hippocampus, CA3
nTPM: 39.8
2137 Male, age 80, left hemisphere 43.7
2436 Male, age 74, both hemispheres 43.0
1867 Male, age 76, both hemispheres 41.9
1891 Female, age 85, both hemispheres 38.4
2620 Female, age 94, left hemisphere 37.3
2861 Female, age 67, both hemispheres 34.4
Parahippocampal cortex
nTPM: 38.2
1990 Female, age 91, right hemisphere 44.4
1850 Male, age 80, both hemispheres 42.5
2245 Female, age 91, both hemispheres 39.9
1933 Female, age 85, both hemispheres 38.4
2692 Male, age 74, both hemispheres 38.2
2250 Female, age 67, right hemisphere 38.1
2693 Female, age 94, both hemispheres 37.8
2532 Female, age 72, left hemisphere 37.4
2018 Male, age 76, both hemispheres 33.5
2622 Female, age 67, right hemisphere 32.0
Perirhinal gyrus
nTPM: 41.0
1847 Female, age 91, left hemisphere 49.3
2521 Female, age 94, right hemisphere 41.9
1794 Male, age 80, right hemisphere 41.1
1841 Female, age 85, right hemisphere 37.7
2848 Male, age 76, right hemisphere 35.0
Subiculum
nTPM: 37.9
1977 Female, age 85, both hemispheres 40.1
1901 Male, age 80, both hemispheres 39.5
2619 Male, age 74, both hemispheres 38.4
2438 Female, age 94, left hemisphere 37.2
2729 Female, age 91, right hemisphere 36.2
2042 Male, age 76, both hemispheres 36.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.7
Samples: 197

Max nTPM: 25.5
Min nTPM: 7.2
Std nTPM: 3.4
Median nTPM: 14.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 23.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 22.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 21.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 21.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 21.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 21.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.0
FF:10153-102I9 76 years, female 36.1
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.7
Pig sample Sample description nTPM
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 34.9
Min nTPM: 26.3
Sample A Female 34.9
Sample B Female 27.8
Sample C Male 30.7
Sample D Male 26.3
Dorsal hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 34.7
Min nTPM: 22.8
Sample A Female 34.7
Sample B Female 34.3
Sample C Male 27.6
Sample D Male 22.8
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 30.5
Min nTPM: 25.7
Sample A Female 27.3
Sample B Female 28.4
Sample C Male 30.5
Sample D Male 25.7
Ventral hippocampus
nTPM: 32.7
Samples: 4

Max nTPM: 41.9
Min nTPM: 23.4
Sample A Female 36.9
Sample B Female 23.4
Sample C Male 41.9
Sample D Male 28.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.9
Samples: 4

Max nTPM: 47.8
Min nTPM: 36.1
Sample A Male 36.5
Sample B Male 39.0
Sample C Female 36.1
Sample D Female 47.8
Hippocampal formation
nTPM: 36.0
Samples: 4

Max nTPM: 38.8
Min nTPM: 32.6
Sample A Male 32.6
Sample B Male 38.8
Sample C Female 37.1
Sample D Female 35.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68862084 Antisense, RP_050301_01_E05, Mouse strain C57BL/6J (56 days, male) 11.1

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