HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:168.2 nTPM
HPA Brain:217.9 nTPM
GTEx:168.2 nTPM
FANTOM5:194.6 Scaled Tags Per Million
Pig:0.9 nTPM
Mouse:238.1 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037134Antibody CAB037140
Glial cells LowLow
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 217.9
Sample id Sample description nTPM
Hippocampus
nTPM: 217.9
1898 Male, age 80, left hemisphere 239.2
2621 Female, age 67, right hemisphere 230.6
2529 Female, age 94, left hemisphere 224.2
1855 Male, age 76, left hemisphere 219.5
1911 Female, age 85, right hemisphere 212.7
2148 Female, age 91, left hemisphere 181.3
Dentate gyrus
nTPM: 204.3
2530 Female, age 94, left hemisphere 270.6
2010 Male, age 76, both hemispheres 256.2
1927 Female, age 91, both hemispheres 189.3
2246 Female, age 85, both hemispheres 186.6
2528 Male, age 74, both hemispheres 174.6
2531 Female, age 67, both hemispheres 148.7
Entorhinal gyrus
nTPM: 173.5
2117 Female, age 91, right hemisphere 220.9
1938 Female, age 85, left hemisphere 180.3
1787 Male, age 76, left hemisphere 174.1
2764 Male, age 80, right hemisphere 171.1
2613 Female, age 94, left hemisphere 151.8
2686 Male, age 75, right hemisphere 142.9
Hippocampus, CA1
nTPM: 198.0
2749 Male, age 80, left hemisphere 264.5
1873 Female, age 85, both hemispheres 193.5
2045 Male, age 76, both hemispheres 193.4
2527 Male, age 74, both hemispheres 182.7
2082 Female, age 91, right hemisphere 155.7
Hippocampus, CA2
nTPM: 204.1
1892 Male, age 76, both hemispheres 226.0
1963 Male, age 80, left hemisphere 219.2
1940 Female, age 85, left hemisphere 212.7
2249 Male, age 74, both hemispheres 211.2
2437 Female, age 94, left hemisphere 194.0
2113 Female, age 91, right hemisphere 161.7
Hippocampus, CA3
nTPM: 188.5
1867 Male, age 76, both hemispheres 223.9
2137 Male, age 80, left hemisphere 220.9
2436 Male, age 74, both hemispheres 201.6
1891 Female, age 85, both hemispheres 175.6
2620 Female, age 94, left hemisphere 157.4
2861 Female, age 67, both hemispheres 151.7
Parahippocampal cortex
nTPM: 173.4
2245 Female, age 91, both hemispheres 213.1
2250 Female, age 67, right hemisphere 210.9
2018 Male, age 76, both hemispheres 204.8
2532 Female, age 72, left hemisphere 185.6
1933 Female, age 85, both hemispheres 169.0
2692 Male, age 74, both hemispheres 167.3
1990 Female, age 91, right hemisphere 166.1
1850 Male, age 80, both hemispheres 150.9
2622 Female, age 67, right hemisphere 135.4
2693 Female, age 94, both hemispheres 131.0
Perirhinal gyrus
nTPM: 156.9
1794 Male, age 80, right hemisphere 163.1
1847 Female, age 91, left hemisphere 162.5
2521 Female, age 94, right hemisphere 154.4
1841 Female, age 85, right hemisphere 154.3
2848 Male, age 76, right hemisphere 150.4
Subiculum
nTPM: 205.8
2042 Male, age 76, both hemispheres 295.9
1901 Male, age 80, both hemispheres 219.8
2619 Male, age 74, both hemispheres 194.8
2438 Female, age 94, left hemisphere 181.6
1977 Female, age 85, both hemispheres 172.6
2729 Female, age 91, right hemisphere 170.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 168.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 168.2
Samples: 197

Max nTPM: 510.6
Min nTPM: 93.0
Std nTPM: 53.5
Median nTPM: 157.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 510.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 416.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 357.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 354.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 337.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 293.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 291.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 281.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 260.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 246.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 244.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 194.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 194.6
FF:10153-102I9 76 years, female 220.0
FF:10169-103B7 60 years, female 169.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.9
Pig sample Sample description nTPM
Subiculum
nTPM: 0.7
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.5
Sample A Female 0.6
Sample B Female 0.5
Sample C Male 1.3
Sample D Male 0.5
Dorsal hippocampus
nTPM: 0.9
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.4
Sample A Female 0.4
Sample B Female 0.7
Sample C Male 1.1
Sample D Male 1.3
Entorhinal cortex
nTPM: 0.4
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.2
Sample A Female 0.2
Sample B Female 0.7
Sample C Male 0.3
Sample D Male 0.4
Ventral hippocampus
nTPM: 0.6
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.1
Sample A Female 1.4
Sample B Female 0.3
Sample C Male 0.1
Sample D Male 0.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 238.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 142.5
Samples: 4

Max nTPM: 157.5
Min nTPM: 129.8
Sample A Male 136.3
Sample B Male 129.8
Sample C Female 157.5
Sample D Female 146.5
Hippocampal formation
nTPM: 238.1
Samples: 4

Max nTPM: 285.0
Min nTPM: 217.1
Sample A Male 225.2
Sample B Male 217.1
Sample C Female 285.0
Sample D Female 225.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
73514809 Antisense, RP_051121_03_B08, Mouse strain C57BL/6J (56 days, male) 8.9

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